Tatumella ptyseos: NCTC11468_01016
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Entry
NCTC11468_01016 CDS
T05493
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tpty
Tatumella ptyseos
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpty03400
]
NCTC11468_01016 (sbcC)
DNA repair and recombination proteins [BR:
tpty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11468_01016 (sbcC)
Archaeal homologous recombinant proteins
NCTC11468_01016 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
SQK72978
UniProt:
A0A2X5NHK4
LinkDB
All DBs
Position
1:complement(926856..930320)
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AA seq
1154 aa
AA seq
DB search
MSRGCSDCLAEVEFEIRGEAWRAFWSQNRARNQPDGKLQPPRAELARCADNVIVADKLQD
KLRYTEQLSGLNFQRFTRSMMLSQGQFAAFLNAPPGERAELLEELTGTEIYGQISRSVFE
QHKALRQQLETLRAGLSGVVLLDDVARQQILHQQQELQTTEQQLQQELTRHEQALLWLNQ
TRQLKDQHRQRELAHQETRERLEQAEPWRLRLQRSEPAEKIRPLWQQLQSRRQSQQELFT
QQTLAAERLKQTETAHRQAHERWQSAEQDYRRQQMQQQQLETLLSEQVIPLDHTLASEEQ
QLNRSLQQLKEQQQQQAETRQQITQTEQQLQQLNSQREHWLNWHQQHAGLAEWGPALPLW
RERLSQWQQQALTARTLHEQMTKQQQELSQQALVLTGLHNTLPPLQQAESAAATDLERLT
QQQQSLENEHTRDALRQTLENAQSRRARQQQLLLLATKSEPLHHQLNKLQPQVAALQQKI
AADEQSLTQFRELFQTERKQLQALITLCELDARITDLAALRETLEAGHPCPLCGSCEHPS
VTEYKQLQPAENQQLKLAQEKRVAELQEQGVRRKEQLAQARQQYGQMTEEITTLTAALAE
SEAQWQSLCLAEGLTLKLTEMPLLQHYLQETEAREQQVRHQLQLREQAALACQQAREHYY
QSRDRLQHHQQQTALMTEQQNTRQAAVEESSKNYRQTTEQAERLLSSLREEISRYALSLP
EEIQAADAWLNTQQELWKKWQHNEQQLRDTEPEQIRLTTSLERMQQDLQRQMTVSAQTEQ
TVTQQRGQLSALREKRHSLFADKDVNEARQSMQRELTQLQQQQQDLLEKSHALQRELSLQ
DGQHRQQEQQYRQLAEQRQNDELQFTDALQKQGFSDSDAFTAALLDEETATSLRRQLQEL
EQASDQTGILLKQVHESLQQHLQQRPEGIPDESNVLAEITVTLKQRLNETIGQQGGLREQ
LKADDHYRQQQQQLIEKISQQQRLLADWDHLNHLIGSASGDRFRRFAQGLTLDHLVWLAN
QQLARLHGRYLLQRQSDDTLELAVIDRWQADNCRDTRTLSGGESFLVSLALALALSDLVS
EKNRIESLFLDEGFGTLDAETLDVALDALDSLNASGKTIGVISHVDAMKERIPLQIRVIK
NNGLGYSKLELPQP
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcggctgcagtgattgtcttgccgaagttgaatttgaaattcgcggtgaggcc
tggcgggcattctggagccagaaccgtgcccgcaaccagccggacggaaaactgcaaccg
ccccgggcggaactggcccgctgtgcggataatgtgattgttgcagataaactccaggat
aagctgcgctacaccgaacagctctccggactcaattttcagcgatttacccggtcgatg
atgctctcgcaggggcagttcgcggctttcctgaatgcgcctccgggcgagcgggctgaa
ctgctggaagaactgaccggtaccgaaatctacgggcagatctcccgcagtgtatttgaa
caacataaagccttacggcagcaactggagacactgcgggccgggttgtcaggggtcgtc
ttgctggatgacgttgcccgccagcagatcctgcaccaacagcaggaactgcaaactaca
gagcagcaactgcagcaggaactcacccgccatgaacaggccttactctggctgaaccag
acccggcaactgaaagaccagcaccggcaacgtgaactggcgcatcaggagacccgcgag
cgtctggaacaggctgaaccctggcgtctgcgtctgcaacgcagtgagccggcggaaaaa
atcagaccgctgtggcagcaattacagagccgccgtcagtcgcagcaggaactgttcacc
caacagactcttgcggccgaacgtctgaaacaaacggagaccgcacaccggcaagcgcac
gaacgatggcagtctgctgagcaagactatcgccggcaacagatgcagcaacagcaactg
gaaaccctgctcagtgaacaggtgatcccgctggatcacacgcttgccagcgaagaacaa
caactgaaccggtctctgcaacagcttaaagagcaacaacagcaacaggcggagacccgt
cagcagatcactcagacagaacagcaactgcaacaactgaacagccagcgggaacactgg
ctgaactggcaccagcaacatgcaggcctggcagagtggggccctgccctgcccctgtgg
cgcgagcggctgagtcaatggcaacagcaggcactgactgccaggacgctgcatgagcag
atgacgaagcaacagcaggaactcagccagcaggcccttgtgctgaccggcctgcataat
actctgccgcccctgcagcaggcagaatccgctgccgccaccgatctcgaacgtctgacg
caacagcagcagtctctggaaaacgagcatacccgcgatgcgctgcgtcagacgctggag
aatgcgcagtcccgacgtgcccgccagcagcaactgctgctgctggccacaaaatctgag
ccgttacatcaccagttgaataagctgcaaccacaggtcgccgcgctgcaacaaaagata
gctgccgatgaacagtcgctgacacagtttcgcgagctgttccagactgagcgcaaacaa
ctccaggcgctgatcaccctgtgtgaactggatgcgaggatcaccgatcttgccgcattg
cgggagaccctcgaggccggacatccctgcccgctgtgcggctcctgtgaacatccgtcg
gtcacggaatataaacaactacagcccgccgaaaatcagcaactgaaactggcgcaggaa
aagcgggtggctgaactgcaggaacaaggcgtccggcgtaaagagcaactcgcccaggcc
cgccagcagtacgggcaaatgacggaggagatcaccaccctgaccgctgcacttgcggag
tcagaagcacaatggcaatcgctgtgcctggctgaaggactgacgctgaagctcactgaa
atgccgctgctgcaacactatctgcaggagacagaagccagggaacagcaggtccgtcac
cagttacagctgcgggaacaggcagccctggcctgtcagcaggcccgggaacactactac
caaagccgtgaccgattacagcaccaccagcaacaaaccgcattgatgacggaacagcaa
aatacccgtcaggccgccgttgaagagagcagtaaaaattaccggcagacaacagaacag
gctgaacgattgctgtcctcattacgggaagagatctcccgctacgcactgtcgctgccg
gaagaaattcaggcggcagacgcgtggctgaacacgcagcaggagctctggaaaaagtgg
caacacaatgaacaacagcttcgcgatacggaaccggaacagatccgtctgacgacgtcg
ctggaaagaatgcagcaggatctccagcggcagatgacggtgagcgcgcaaacagaacag
actgtcacacaacaacgcggacagctgtcagccttgcgggagaaacgccacagcttattt
gcggataaagacgtcaatgaggcacggcagtccatgcagcgagagttgacacaacttcag
caacagcagcaggatctcctggaaaaatcccatgcgttgcagcgtgaactcagcctgcag
gatggtcagcatcgccagcaggagcaacaatatcgccagctggcagaacagcggcagaac
gacgaattgcagtttaccgatgccctgcagaaacagggcttcagcgacagcgatgctttt
actgctgccctgctggacgaagagaccgccacttccctgcgccggcaactgcaggaactg
gaacaagccagcgatcagaccgggatcctgttaaaacaggtgcatgagagcctgcagcaa
catctgcaacagcggccggagggcattccggacgagagcaacgtactggcagaaataacc
gtcactctgaaacagcgcctgaatgaaactatcggccagcagggaggacttcgcgaacag
cttaaggccgatgatcactaccgtcagcaacaacagcagttaatcgaaaagatcagtcag
caacagaggctgctggctgactgggatcatcttaaccatctgatcggatcggccagcggg
gatcggttccgccggtttgcccagggcctgacgctggatcatctggtctggctggccaac
cagcaactggcgcgtcttcacgggcgctatctgttgcagcgtcagtcggatgacactctg
gaactggcggtcattgatcgctggcaggcggacaattgccgggatacacgtacattatcc
ggcggggaaagtttcctggtcagcctggcgctggcgctggcgttatccgacctggtgagc
gagaagaaccggattgagtcactcttcctcgatgaaggctttggcacgctggatgcggaa
acactcgacgtggcactcgatgcgctggatagcctgaacgccagcggtaaaaccatcggt
gtgatcagccatgttgacgccatgaaagaacggatcccgttacaaatccgggtcatcaaa
aataatggcctcggttacagcaaactcgaactgccgcagccctga
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