Tatumella ptyseos: NCTC11468_01065
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Entry
NCTC11468_01065 CDS
T05493
Symbol
hupB
Name
(GenBank) NS1
KO
K03530
DNA-binding protein HU-beta
Organism
tpty
Tatumella ptyseos
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpty03032
]
NCTC11468_01065 (hupB)
03036 Chromosome and associated proteins [BR:
tpty03036
]
NCTC11468_01065 (hupB)
03400 DNA repair and recombination proteins [BR:
tpty03400
]
NCTC11468_01065 (hupB)
DNA replication proteins [BR:
tpty03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC11468_01065 (hupB)
Chromosome and associated proteins [BR:
tpty03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC11468_01065 (hupB)
DNA repair and recombination proteins [BR:
tpty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC11468_01065 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Ala_racemase_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
SQK73808
UniProt:
A0A2X5NJX9
LinkDB
All DBs
Position
1:977353..977625
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAANADISKAAAGRVLDAFMGAVTDSLKEGDEVALVGFGTFSVRERAERTG
RNPQTGKEITIPAGKVPGFRAGKALKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatcacaactgatcgacaaaattgctgcaaatgcggatatctccaaggctgcg
gccggacgtgtattggatgcctttatgggcgcagtgactgattcactgaaagagggtgat
gaagtcgctctggtcggtttcgggactttctcagtacgcgaaagggctgagcgcaccgga
cgtaaccctcagaccggtaaagaaattactatcccggccggtaaagttccgggcttccgt
gcaggtaaagcgctgaaagactctgttaattaa
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