Tatumella ptyseos: NCTC11468_01199
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Entry
NCTC11468_01199 CDS
T05493
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tpty
Tatumella ptyseos
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpty03400
]
NCTC11468_01199 (phrB)
Enzymes [BR:
tpty01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NCTC11468_01199 (phrB)
DNA repair and recombination proteins [BR:
tpty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NCTC11468_01199 (phrB)
Prokaryotic type
NCTC11468_01199 (phrB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
SQK73984
UniProt:
A0A2X5SER1
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All DBs
Position
1:1091911..1093353
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AA seq
480 aa
AA seq
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MKTHLVWLRNDLRLNDNPALYAACQDPDARVIALYIATPGQWQQHDVSGRQLSFIRDSLQ
HLSEDLSGLGIPLLFAACDDFTQSVEQLSGICHRYEVTQVFYNYQYELNEHRRDQRAEQK
LAEEDIVSQGFHDGTLVPPGSVLTGKGTMYNVYTPFSKALVKALLHELPECYPAPDKRAH
PADIQANDIPSLSEQSRDYDRECFPPGHRAALQRLRKFSQQGAEEYHRLRDFPEHAGTSV
LSPYLATGQISARQCLLRILHDHPEALSGGNAFSWLNEIFWREFYIHLLVAYPALCRHQP
FTDWTANVRWRKDDEQLRAWQQGKTGFPVVDAAMRQLNETGWMHNRLRMIVASFLVKDLL
IDWREGERYFMSQLLDGSLAANNGGWQWAASTGTDAAPYFRIFNPQLQGERFDPAGNFIR
RWIPELSAVPDKAIHDPVNWAKKHGKTLDYPAQIVDHKQARQTTLQAYEAARKHNPSPGK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaactcatcttgtctggctgagaaatgacttacgtctgaatgataatcctgcactt
tatgcggcttgccaggatcctgatgccagggtgatagccctgtacatcgccaccccgggg
caatggcagcagcatgatgtgtccggacgtcagctatcgtttattcgtgacagtctgcaa
catctgagtgaagaccttagcgggctggggatcccgctgttgtttgctgcctgtgatgat
tttacgcagagtgtggaacagctttccggtatctgtcacaggtatgaggtgactcaggtt
ttttataactaccaatacgaactgaacgaacaccgtcgagaccaacgggcagagcaaaaa
ctcgcggaagaggatatcgtgagtcaggggttccatgacggaaccctggttcctcccggc
agcgtactgaccggtaaagggacaatgtacaatgtttatacccctttcagtaaagcgctg
gtcaaagcgcttttacatgaactcccggagtgctaccccgcacctgacaagcgggcacat
ccggcggatattcaggcgaatgatatcccgtcattgagtgagcagagtcgcgactatgac
agggaatgttttcctcccggtcatcgggcggcccttcagcgcctgcgtaagttcagtcag
caaggggctgaagagtatcatcgtctgcgggacttccctgaacatgcgggcaccagcgta
ttatctccgtacctggcgaccgggcagatttcggcacggcagtgtctgttacgtatcctt
catgaccatcccgaagccctgtccggcgggaatgccttcagctggctgaatgaaatcttc
tggcgggagttttatattcatctgctggtggcttatccggcattgtgtcgtcatcagccc
tttaccgactggacggcaaatgtccgctggcgcaaggatgatgaacaattacgggcctgg
caacagggtaagaccgggtttccggtggtggatgccgctatgcggcaactgaacgaaacc
ggctggatgcataaccggttgcggatgattgtcgccagtttcctggtgaaggatttgctt
atcgactggcgggaaggtgagcgatactttatgtcgcaattgctggatggttcgctggcc
gctaataacggtggctggcaatgggccgcctccaccggtaccgatgcggcgccgtacttc
cgcatttttaacccgcaactgcagggtgaacgttttgaccctgccggtaatttcatccgg
cgctggatccctgagctgtccgctgtgccggataaagctatccatgatccggtcaactgg
gcgaaaaaacacggcaaaacactggattatccggcacagattgttgatcataagcaggcg
cgtcagacgactctgcaggcctacgaggctgcccggaagcacaatccatcccccggaaaa
tga
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