Tatumella ptyseos: NCTC11468_01991
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Entry
NCTC11468_01991 CDS
T05493
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tpty
Tatumella ptyseos
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpty03016
]
NCTC11468_01991 (rnb)
Enzymes [BR:
tpty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NCTC11468_01991 (rnb)
Transfer RNA biogenesis [BR:
tpty03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC11468_01991 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
SQK75000
UniProt:
A0A2X5PNT9
LinkDB
All DBs
Position
1:1800107..1802092
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AA seq
661 aa
AA seq
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MIRVKLSAAVRPRNYKIMFQDNPLLSQLKETLHAQTPRAEGVVKGTDKGFGFLEVDAQKS
YFIPPPQMKKVMHGDRVVAVIQTNNGKESAEPETLVEPFLTRFVGRVQKKDDRLSIIPDH
PLLKDAISCRPARHLEHEFQAGDWAVAEMRRHPLKGDRSFYAELTGFITFAEDHLAPWWV
TLSRHNLEREAPDVGFGEMLDEQLTREDLTALEFVTIDSASTEDMDDALYTEELPDGKLR
LTVAIADPTAYVPEGSELDKLAAQRAFTNYLPGFNIPMLPRELSDDVCSLRPGVRRPVLA
CHIVIDKDGTPEAETRFFAAWIESKAKLAYDNVSDWLENTGDWQPASEAIAQQITLLQRF
CLARNEWRRKNALVFKDRPDYRFILGEKGEVLKIVAEPRRIANRMIEEAMITANICAAKV
LGEALGFGIYNVHAGFDEANAEQVTGVLAGHGITVDPKEIATLEGFKTMRRELDSMPTQY
LDSRIRRFQSFAEISTKPGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIILGQQAELP
AEELTTIMGERRRLNRMAERDVGDWLYARYLAPYAGTDQRFPAEIIDISRGGMRVRLTDI
GAVAFIPAPFIHSVRDELVCSQDSGTVQIKGEERYRVTDLIDVTIAEVRMENRNVVARPV
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcgtaaaactgtcagccgctgttaggccacgaaactataaaattatgttccag
gataacccgctgctgtcgcagctgaaagaaacacttcatgcacaaactccccgcgcggag
ggtgtggtaaaaggtaccgataaaggctttggctttctggaagtcgatgcccagaagagc
tactttattccgcctccgcagatgaaaaaagtgatgcatggcgaccgtgtggttgctgtc
atccagaccaataacggtaaagaaagtgccgaaccggaaaccctggtagagccgtttctg
acccgctttgtgggtcgcgtccagaaaaaagatgaccggttatccattattcccgatcat
ccgctgctgaaagatgccatttcctgtcggccagcccgtcacctggaacatgaatttcag
gccggagactgggctgtcgctgaaatgcgccgtcatccgttaaaaggtgaccgcagcttt
tacgccgaactgaccgggttcattaccttcgctgaagatcatctggccccgtggtgggtg
acactgtcacgccacaatctggagcgtgaagccccggacgttggtttcggtgaaatgctc
gacgagcagttaacccgtgaagacctgacggcgctggaatttgtcactatcgatagtgcc
agcacggaagatatggacgatgccctgtacaccgaagagttgcctgacggtaaacttcgc
ctgacggtggccattgcagacccgacggcgtatgttcccgaggggagtgagctggataaa
ctggccgcacagcgtgcctttaccaactatctgccgggctttaacatcccgatgctgcct
cgtgagctgtctgatgatgtctgctcgctgcgtccgggcgtacgtcgtccggtgctggcc
tgtcatatcgttatcgataaagacggcacgccggaagcggaaacccgtttctttgccgca
tggattgaatcaaaagccaaactggcttatgacaatgtctctgactggctggaaaatacc
ggtgactggcagcctgccagcgaagccattgctcagcagatcaccctgctgcaacgtttt
tgtctggcccgtaatgaatggcgtcgtaagaatgcgctggttttcaaagatcgtccggat
tatcgctttattctcggtgagaaaggcgaagtgctgaaaatcgttgcagaaccccgccgt
attgctaaccgcatgattgaagaagccatgatcaccgccaatatctgtgcggctaaggtt
ctgggtgaggctctcggctttggaatttataacgtccatgccggtttcgatgaagctaac
gcagagcaagtcacaggcgttcttgcaggtcatggtattacggtggacccgaaagaaata
gcgacgctggaaggctttaagactatgcgccgcgaactggacagtatgcccacccagtat
ctggacagccgcattcgccgcttccagtcattcgctgagatcagcaccaagccgggtcct
catttcggtctgggactggaagcctacgcgacctggacctctcctatccgtaaatatggt
gacatgatcaaccatcgtttactgaaggcgattatcctgggccagcaggctgaactgccg
gcagaagagctgaccaccattatgggtgagcgtcgccgtctgaaccgtatggcagaacgg
gatgtcggggactggttatatgcccgttatctggccccttatgccggtaccgatcaaagg
ttccctgcagaaatcattgatatctcgcgcggcggaatgcgtgtcaggctgacggatatc
ggtgccgtggcctttatccctgcaccgttcatccacagtgtgcgtgatgaactggtgtgc
agccaggacagtggtaccgtgcagatcaaaggtgaagaacgctatcgtgtgacagacctg
attgacgtgacgattgctgaagtccgtatggaaaaccgcaacgtagttgcccgcccggtc
gtctga
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