Tatumella ptyseos: NCTC11468_02262
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Entry
NCTC11468_02262 CDS
T05493
Symbol
pnl
Name
(GenBank) Pectin lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tpty
Tatumella ptyseos
Pathway
tpty00040
Pentose and glucuronate interconversions
tpty01100
Metabolic pathways
tpty02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NCTC11468_02262 (pnl)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC11468_02262 (pnl)
Enzymes [BR:
tpty01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
NCTC11468_02262 (pnl)
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Motif
Pfam:
Pectate_lyase_4
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-ProteinID:
SQK75338
UniProt:
A0A2X5NP78
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Position
1:complement(2055197..2056351)
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AA seq
384 aa
AA seq
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MKTKLRMVQASLLAALSLGGFACSAADTGGFSNTTGGDSYPAVTVTTLSQLESAVNSGQH
HIIVSGTLYGGSGLTTLTFSSANNNNTTIEGAAGGKAALENIQLKFDGELLASGTNIQNI
KVSNLTFFGKISDLQAMPQQVYGSSDSTKKVGINYEGISLRRVTNALITHCAIYDTSDDL
MSVALSSDNVTLSYNHLYFSDSWVNMSPDPVWNWVGYNTDLAGERLAMVVGANTSDSWQG
TGKLHVTLHHNWIGPNVRGRPLFRGWIHAYSNYFDNSETYSGTDYNTATDGNKYPKQQYE
ALQLVNGSVVYSESNYFLKTNNTNTLTNDGSSYTDKFYEKNNTYSGTTGTSATGTTFSSP
VSYSYSVTASASVPAYVMANAGPK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaattacggatggttcaggcttcactactggcagcattaagtcttggtggc
tttgcgtgttcggcggcagataccggcgggttctcaaataccaccggcggagatagttat
ccggcggttaccgtcaccacccttagtcagctggaaagtgcggtaaacagtggtcagcat
catattattgtcagtggcaccctttacggaggttcgggattaacgactctgacattctcg
tctgccaacaataacaatacgaccattgagggggctgcgggcggcaaggcagcactggaa
aatattcagttgaaatttgacggtgagctgctggccagcggcacaaatattcagaatatt
aaggtctctaacctgacgttctttggtaagatttcagatctacaggcgatgcctcagcag
gtatacggttcatctgacagcactaaaaaggttgggatcaattacgaaggcatctcttta
cgtcgtgtcactaatgccctgatcacgcactgtgccatttatgacaccagtgatgattta
atgagtgtggcactgagttcagataatgtgactctgtcgtataatcacctttacttcagt
gacagttgggtcaatatgagtccggatccggtctggaactgggtggggtataatacggat
cttgccggtgaacgtttggccatggtcgtgggggcgaatacctctgactcctggcagggg
acggggaaattgcacgtcacattacaccataactggattggtccgaacgtgcgcggacgt
ccgttattccgtggctggatccatgcgtacagtaactattttgataatagcgaaacctac
tcaggcacggattataataccgcgacagacggcaataaatatccgaaacaacagtatgaa
gcactgcagctggtgaatggcagcgtggtatattccgaatccaattacttcctgaaaacg
aataataccaacacgctgactaacgatggcagcagctataccgataagttctacgagaag
aataatacctacagcggaaccaccggaacatcggccaccggcaccacgttcagctctccg
gtcagttattcttactctgtcaccgccagtgccagtgtaccggcctatgtgatggcaaac
gccggtcctaaatga
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