Tatumella ptyseos: NCTC11468_02486
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Entry
NCTC11468_02486 CDS
T05493
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tpty
Tatumella ptyseos
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpty03032
]
NCTC11468_02486 (gyrA)
03400 DNA repair and recombination proteins [BR:
tpty03400
]
NCTC11468_02486 (gyrA)
Enzymes [BR:
tpty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC11468_02486 (gyrA)
DNA replication proteins [BR:
tpty03032
]
Prokaryotic type
DNA Topoisomerases
NCTC11468_02486 (gyrA)
DNA repair and recombination proteins [BR:
tpty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC11468_02486 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
SQK75622
UniProt:
A0A2X5PFK9
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All DBs
Position
1:complement(2267913..2270549)
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AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDFVPNYDGTEQIPEVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLNEVINGCLAYIDDNEITVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRGRGQVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKIMPLKDILEAFVRHRRE
VVTRRTIYELRKARDRAHILEGLAVALANIDPIIELIRRAPSPAEAKAGLVATPWQLGNV
AAMLEKAGDDAARPEWLEPEFGIRDGAYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKQ
LLEEIAALIFILQDSDRLMEVIREELVAVREQFGDKRRTEITANSADINLEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGSRGRPIVNLLPLEANERITAILPVREYSEGLNIFMATASGTVKKTAL
TEFSRPRSAGIIAVNLRDDDELIGVALTDGNDEAMLFSAAGKVVRFSEQAVRPMGRTASG
VRGIRLAENDRVVSLIIPREEGAILTVTQNGYGKRTDNTEYPTKSRATQGVISIKVTERN
GPVIGAVQVVDSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAEDENVVGLQRVA
EPVEEDELDAIDGTVAEGEDDIVQEAESDDDAAPEDEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacttagcaagagaaatcacaccggttaatatcgaggaagaattaaaaaattct
tatcttgattatgccatgtcggtcatcgttggccgtgcattacctgacgtccgtgatgga
ctgaagcccgtacaccgtcgtgtactgtttgccatgagcgaactgggtaatgactggaat
aaagcctacaaaaaatctgcccgtgttgtcggggatgtgataggtaaatatcacccgcac
ggtgattctgccgtttatgacaccatcgtccgtatggctcagcctttctcacttcgctat
atgctggtggacgggcagggcaactttggttctatcgatggcgattccgcagcagccatg
cgttataccgaagtccgtatggcgaaaattgcccatgaactgctggcagacctggacaaa
gaaaccgttgattttgtacccaactacgatggtacagaacagatccctgaagttctgccg
acgaaagtccctaatttgctggttaacggctcatccggtattgcggtggggatggcaaca
aacattcctccgcataacctgaatgaagtgattaacggttgtctggcctatattgatgat
aatgagatcaccgttgaaggcctgatggaacacattcctggcccggacttcccgacggct
gcgattatcaatggccgtcgtggtattgaagaggcctaccgcaccggacgtggcaaaatt
tatatccgcgggcgggggcaggtcgagactgacgccaaaaccggccgtgaaacgattatc
gtgcacgaaatcccttatcaggtgaacaaagcacgtttgattgaaaaaatcgcagaactg
gttaaagagaagcgaatcgaagggatcagcgcgctgcgcgatgaatctgacaaagacggt
atgcgtatcgttattgagattaagcgcgatgccgtcggtgaagtggtattaaataacctt
tattcactgacccagttacaggtatctttcgggatcaatatggttgccctgcatcagggg
cagccaaaaattatgccgctgaaagatattctggaggccttcgtacgtcaccgtcgtgag
gtcgtgacccgccggaccatttacgaactgcgtaaagcccgtgaccgtgctcatatcctg
gaaggtctggctgtagcgttggccaacattgacccgattatcgagttaattcgtcgtgca
ccttcaccggcagaagccaaagccggtctggtagccacgccgtggcaactgggtaacgtc
gccgccatgctcgaaaaagccggtgatgacgccgctcgcccggaatggctggagccggaa
ttcggtatccgtgacggtgcatactacctgaccgaacagcaagcccaggccattctggat
ctccgtcttcagaaactgaccgggatggagcatgagaaactgctggatgaatataagcag
ctgctggaagaaattgccgcactgatctttattctgcaggactctgaccgtctgatggaa
gttatccgcgaagagctggtggctgtccgtgaacagtttggcgataagcgtcgtactgaa
atcacggcaaacagcgcggatatcaatcttgaagacctgatcaatcaggaagatgttgtc
gttacgctttctcaccagggctatgtgaaatatcagccactgaccgattatgaagcgcag
cgtcgtggtggcaaagggaagtcagcggccaggatcaaagaagaagacttcattgatcgt
ctgctggttgcgaatacccatgacactatcctctgcttctcaagccgtggtcgcctctac
tggatgaaagtctaccagttaccggaagccagccgcgggtcacgtggccgtcctatcgta
aacctgctgccgctggaagcgaacgaacgtattaccgcaattctgccggtacgtgaatac
tccgaaggactgaatatctttatggcgaccgccagcggtaccgtgaagaaaaccgccctg
accgaattcagccgtccgcgtagcgccgggatcatcgccgtcaacctgcgtgatgacgat
gagctgatcggtgtggcactgactgacggtaatgatgaagcgatgctgttctctgctgcc
ggtaaggtggttcgcttctctgaacaggctgtcagaccgatgggccgtactgcatcaggt
gttcgtggtattcgactggccgaaaatgaccgggtggtttcactgatcattcctcgtgaa
gagggtgcgatcctgacagtgacacagaacggttacggtaaacgtacggataataccgag
tacccgacgaagtcccgtgccactcagggtgttatctctatcaaagtgacagagcgtaac
ggtccggtgatcggtgcggtgcaggtggtcgacagtgatcagattatgatgatcaccgat
gccggtaccctggtacgtacccgtgtttctgaagtcagtgtggttggccgtaatacacag
ggcgtgatactgatccgtactgcggaagatgagaatgtcgtgggcctgcaacgtgtggct
gaaccggttgaagaagatgaactggatgctattgatggtacggttgcagaaggtgaagac
gacattgttcaggaagccgaatcagatgatgatgcggcaccggaagacgaagaataa
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