Tatumella ptyseos: NCTC11468_02850
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Entry
NCTC11468_02850 CDS
T05493
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
tpty
Tatumella ptyseos
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpty03009
]
NCTC11468_02850 (srmB)
Enzymes [BR:
tpty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC11468_02850 (srmB)
Ribosome biogenesis [BR:
tpty03009
]
Prokaryotic type
rRNA helicases
NCTC11468_02850 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
SQK76008
UniProt:
A0A2X5NR15
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All DBs
Position
1:2598376..2599701
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AA seq
441 aa
AA seq
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MTVTTFSELELDESLLNALQDKNYTRPTAVQAEAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKYTHLDISTITGGVAYMNHA
EVFSTNQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAAETRW
RKQTLLFSATLEGEHIEEFAQRILNEPLVIDAEPSRRERKKIQQWYYRADDLEHKTKLLI
HLLKQPEASRTIVFVRKRERLHEVAEWIRQADIRCSYLEGEMVQAKRNEAIKRLNEGRVN
VLVATDVAARGIDIDDVTLVINFDLPRTADTYLHRIGRTGRAGRKGTALSLVEAHDNELL
LKIGRYLNEPLKARTISELRPQTRAPAATGPKKPSRKQLEKRKEKKKEDEKKPRVKMRHR
DTKNIGKRRTPSSQANESSES
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccactttttccgaacttgaacttgatgaaagcctgctgaatgcattgcag
gataagaactacacacgtcccactgcagtacaggcagaggcaattccacctgctctggat
ggacgtgatgtcctgggttcagcaccaacaggcaccggaaaaacagcggcctatttactg
ccagctcttcaacatctgctcgatttcccgcgcaagaaatccggcccgccccgaattctt
atcctgacgccgacccgtgaactggcgatgcaggttgccgatcaggctcgtgagttagcg
aaatatacccatctggatatttcgaccatcaccggtggtgtggcctatatgaaccatgcc
gaagtgttcagtacgaaccaggatgtggtggtggcgaccactggacgtctgctgcagtac
attaaagaagaaaactttgactgccgcgccgttgagacgctgatcctggatgaagccgac
agaatgctggatatgggttttgcacaggatatcgaaacgattgctgctgaaacccgctgg
cgtaaacagaccctattgttctccgccaccctggaaggagagcacattgaagaatttgct
cagcgtattctgaatgagccactggtcatcgatgcagagccaagccgtcgtgaacgcaag
aaaattcagcaatggtattaccgcgcggatgacctggagcataaaacaaaactgctgatc
cacctgctgaagcaaccggaagcgtcccgtactatcgtttttgtgcgtaagcgcgaacgt
ttgcacgaagtagctgaatggatccgtcaggcagacattcgctgcagctatcttgaaggc
gaaatggttcaggcaaaacgtaacgaagccatcaaacgtctgaatgaaggccgcgttaac
gtgctggtagcgactgatgttgccgcccgcgggattgatattgatgacgtgacgctggtg
attaacttcgacctgccacgtacagctgacacctatctgcaccgtatcgggcgtaccgga
cgtgccggtcgtaaaggaaccgccctgtctctggtggaagcccatgacaatgaactcctg
ctgaagataggccgctacctgaatgagccactgaaagcccgtactatcagcgaactgcgg
cctcagacgcgggcacctgcggcaaccggaccgaaaaaaccctccaggaagcagctggaa
aaacgtaaagagaagaaaaaagaagacgagaaaaagccacgggtcaaaatgcgtcaccgt
gataccaaaaatatcggtaagcgccgcacgccgtcttcccaggcaaatgaaagctctgaa
agctga
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