Tatumella ptyseos: NCTC11468_03288
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Entry
NCTC11468_03288 CDS
T05493
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tpty
Tatumella ptyseos
Pathway
tpty03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NCTC11468_03288 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpty03019
]
NCTC11468_03288 (orn)
03009 Ribosome biogenesis [BR:
tpty03009
]
NCTC11468_03288 (orn)
Messenger RNA biogenesis [BR:
tpty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC11468_03288 (orn)
Ribosome biogenesis [BR:
tpty03009
]
Eukaryotic type
Pre-60S particles
RNases
NCTC11468_03288 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
SQK76894
UniProt:
A0A2X5SN80
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All DBs
Position
1:complement(3018629..3019177)
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AA seq
182 aa
AA seq
DB search
MATASENNLIWIDLEMTGLDPERDRIIEIATLVTDADLNILAEGPVIAVHQSAEQLSLMD
DWNVRTHTGSGLVERVKQSQYDDRAAELATLEFLKQWVPANASPICGNSIGQDRRFLYKY
MPELEAWFHYRALDVSTLKELARRWKPEILPGFSKAGTHQALDDIRESVAELRYYRDNFL
SL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcaagtgaaaacaatctgatttggattgacctcgaaatgaccggcctggac
ccggaacgggatcggatcatagaaatcgcaacgctggtgaccgatgcggacctgaatatt
cttgccgaagggccagtgattgcggttcaccagtccgccgaacaactgtctctgatggat
gactggaatgttcgtacccataccggcagcggtctggttgaacgggttaagcagagtcag
tacgatgaccgggcggcagagcttgccacgctggaatttttaaaacagtgggtccccgcg
aatgcctcccctatttgcgggaacagtatcggtcaggatcgccgtttcctctacaagtat
atgcctgaactggaagcatggttccattaccgggcactggatgtgagtacgctgaaagag
ctggctcgtcgctggaaaccggaaatcctgccgggtttcagtaaagcggggacgcatcag
gcactggatgatattcgtgagtcagtggctgaattgcgctactaccgggataatttcctc
agtctttaa
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