Tatumella ptyseos: NCTC11468_03832
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Entry
NCTC11468_03832 CDS
T05493
Symbol
fecI
Name
(GenBank) Probable RNA polymerase sigma factor fecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
tpty
Tatumella ptyseos
Pathway
tpty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC11468_03832 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpty03021
]
NCTC11468_03832 (fecI)
Transcription machinery [BR:
tpty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC11468_03832 (fecI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
HTH_36
HTH_24
HTH_7
TnsD
HTH_SB
Phage_terminase
HTH_3
HTH_28
HTH_11
DUF2774
HTH_Mga
HTH_10
Rv2175c_wHTH
Fe_dep_repress
ketoacyl-synt
Motif
Other DBs
NCBI-ProteinID:
SQK77470
LinkDB
All DBs
Position
1:complement(3538670..3539191)
Genome browser
AA seq
173 aa
AA seq
DB search
MTDSAISSAALTLDKLYHSHHGWLTVWLTRKLHSAFDAEDVAHDTFLRLFGKDTIPTIRD
PKSFLCTVAKRVMVDLFRRQALEQSYLQMLASLPEAQQPSEEIRQIQLETLQQVDRMLDT
LSEKSRKAFLLSQLDGMQYRDIAEVLGVSVSSVKKYIAKATEHCLLFRLENGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgactgactccgccatttcttctgctgccctgacgctggataaactctatcattcacat
catggctggttaacggtctggcttacccggaaattacactccgcttttgatgccgaagac
gttgcgcatgacacttttttacggcttttcgggaaagatacaatacccactatccgcgac
ccgaaatcttttctttgtaccgtagcgaaacgggtaatggttgaccttttccgccgccag
gcactggaacaaagctatttacagatgctggcctctctgccggaagcgcagcaaccgtca
gaagaaatccgccagatccagctggagaccctgcaacaggtcgatcgcatgctggatact
ctcagtgaaaaaagccgtaaggcttttctgctctctcagctggacggcatgcaatatcgc
gatattgcagaagtcctgggcgtatcggtcagttcagtgaagaaatatatcgccaaagcc
actgagcactgtctgctcttccggctggagaatgggctgtaa
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