KEGG   Tatumella ptyseos: NCTC11468_03874
Entry
NCTC11468_03874   CDS       T05493                                 
Symbol
apxIB_4
Name
(GenBank) RTX-I toxin determinant B
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
tpty  Tatumella ptyseos
Pathway
tpty02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:tpty00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    NCTC11468_03874 (apxIB_4)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tpty01002]
    NCTC11468_03874 (apxIB_4)
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tpty02000]
    NCTC11468_03874 (apxIB_4)
   02044 Secretion system [BR:tpty02044]
    NCTC11468_03874 (apxIB_4)
Peptidases and inhibitors [BR:tpty01002]
 Cysteine peptidases
  Family C39
   NCTC11468_03874 (apxIB_4)
Transporters [BR:tpty02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    NCTC11468_03874 (apxIB_4)
Secretion system [BR:tpty02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   NCTC11468_03874 (apxIB_4)
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 ABC_tran SMC_N AAA_29 AAA_21 AAA_16 T2SSE AAA_22 AAA_30 Guanylate_cyc_2 SbcC_Walker_B AAA_24 AAA AAA_23 ORC-CDC6-like NTPase_1 Mg_chelatase AAA_14 AAA_18 RsgA_GTPase ATPase_2 NACHT FtsK_SpoIIIE DUF87 Rad17 AAA_25 nSTAND3 cobW AAA_28 PRK Cytidylate_kin
Other DBs
NCBI-ProteinID: SQK77511
UniProt: A0A2X5NVD4
LinkDB
Position
1:3579649..3581760
AA seq 703 aa
MNNEFFNDIIRRIQLSPWRRVPRILQTEASECGLACLVMVCRYFGMDIDLLNMRRRFGIS
SHGATLATIIHIAGQLSLKTRPLSLDIDEICQLKRPCLLHWDMSHFVVLVAVKRGRFIIH
DPAFGRRMVGLTEISRHFSGVALEVWPDSEFIPVKARSKLNLRSLMKNISGLPGFLIRIF
CLSLLVEAVNLLIPMGTQLVMDHVIIARDHDLLGLICLGLLTFILFRTFISMLRAWTSLV
MQSLIDIQWKTGLMDHLLRLPLAYFEKRKLGDIQSRFSSLDTIRSTLTSSLVSGTIDVIV
SVGVFVMMLLYGGWLIAVVLGFTLIYMVLRLSTYQRYRQAQEEHIVKEARAGSHFMETLY
GISTLKVLGLTEIRSRFWLNLNIDTTNAGIRMTRLDMLFGGVNALISTLDQVIILWLGAS
MVIDGQMTLGMFVAFNAYRGQFSERASALIDMVLQLRMLALHNDRIADIVLQETEVYQPA
RRLCPPDEAASLQVRDLGYQYDKLSRPVFSGVSFLVAAGESVAITGPSGSGKTTLMKVMS
GLLSSDTGNVLFNGIDISGAGLNNYRDCIACVLQEDKLFAGSIAENISSFSEQRDPDRII
SCAQSSHIHDEIMQMPMGYETLVSELGGSLSGGQKQRLLIARALYRRPAILFLDEATSHL
DLDNEARVNASIRELKITRIFIAHRPSTIASADRVIELSRVVS
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgaataatgaattctttaatgacatcatccggcggatccagctgtcgccctggcgacgg
gttccccgcattctgcaaacggaggcttctgaatgcggtctggcgtgtctggtcatggtg
tgtcgttacttcgggatggacatcgacctgctcaatatgcgtcgtcgctttggtatctcg
tcgcacggcgcgaccctggccactatcattcatatcgccgggcaactgtccttaaaaaca
cgtcctctgtcgctggatattgatgaaatctgccagctcaaaagaccctgtctgctgcac
tgggatatgagtcactttgtggtgctggtggcggtgaagcgggggcgttttattatccat
gacccggcatttggtcgcagaatggttggtcttactgaaatctcccgccatttctccggt
gtggcgctggaagtctggccggatagtgagtttattccggttaaagcccgttcaaaactg
aacctgcgatcgctgatgaaaaatatcagcggattaccgggctttctgatccggatcttc
tgtttatcgttactggtagaagcggtcaatctcctgatcccgatgggcacccagttggtg
atggatcatgtcatcattgcccgggatcatgatctgctgggcctgatctgcctcggactg
ctgacatttatcctgttccgcacctttatcagtatgctgcgggcctggacgtcgctggtc
atgcagtcactgatcgatattcaatggaagaccgggctgatggatcacttactccggctg
ccgctggcctactttgaaaaacgtaagctcggcgatatccagtcccgtttttcgtcgctg
gatactatccgctccaccctgaccagtagtctggtgagcgggactatcgatgttattgtt
tctgtcggcgtattcgtgatgatgctgttatacggtggctggttaattgcagtcgtactg
ggatttacgttgatctatatggtattacgtctgtcgacttatcagcgctaccgccaggcc
caggaagagcacattgtcaaagaggcccgtgccgggtcccattttatggagacgctttac
gggatcagtacactaaaggtgctgggattaacagaaatacgttccagattctggcttaac
ctgaatattgatacgactaacgccggtatccggatgacgcgtcttgatatgttatttggc
ggcgttaacgcgctgatctccacccttgatcaggtgatcatcctgtggctgggtgcatca
atggtcattgacgggcagatgacgctggggatgtttgtggcctttaatgcctaccgcggg
cagttttctgagcgcgcttcggcactgatagatatggtgttgcagttaagaatgctggca
ttacataacgacaggattgccgatattgtcctgcaggaaaccgaggtataccagcctgca
agaagactttgcccgccagacgaagcggccagcctgcaggtgcgggacttggggtatcag
tatgacaaactgagccggcctgttttttcaggtgtcagcttcctggtcgccgccggagaa
agtgtcgcgatcacggggccttcggggtcgggtaaaaccacactcatgaaagtgatgagc
ggattactgtcatctgataccgggaatgtactttttaacggtattgatatcagcggcgcc
ggactgaataattatcgtgactgtattgcctgtgtgttgcaggaggataagttattcgcc
ggatctattgccgaaaatatttccagctttagtgagcagagagacccggaccggataatt
tcttgtgcgcaaagcagtcatatccatgatgaaataatgcaaatgccgatgggatacgaa
accctggtcagtgaactggggggtagcctgtccggaggccagaaacagcgtttactgatt
gccagggctctctaccgccgcccggccatactgttcctcgatgaagcgaccagccatctc
gatctcgacaatgaagccagggtcaacgcctctattcgtgaattaaaaatcacccgtatc
tttattgctcatcgcccttcaaccattgccagtgcagaccgggtgattgagttgtcccgt
gtcgtctcctga

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