Treponema pallidum subsp. pallidum DAL-1: TPADAL_0251
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Entry
TPADAL_0251 CDS
T01748
Name
(GenBank) bacterial DNA-binding factor
KO
K04764
integration host factor subunit alpha
Organism
tpu
Treponema pallidum subsp. pallidum DAL-1
Brite
KEGG Orthology (KO) [BR:
tpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpu03032
]
TPADAL_0251
03036 Chromosome and associated proteins [BR:
tpu03036
]
TPADAL_0251
03400 DNA repair and recombination proteins [BR:
tpu03400
]
TPADAL_0251
DNA replication proteins [BR:
tpu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TPADAL_0251
Chromosome and associated proteins [BR:
tpu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
TPADAL_0251
DNA repair and recombination proteins [BR:
tpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
TPADAL_0251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AEZ60575
LinkDB
All DBs
Position
264138..264455
Genome browser
AA seq
105 aa
AA seq
DB search
MKRVRRTRSFVVDALCDEVDLSRRHVARVVDSFVSVVTAALERGETVELRDFGVFESRVR
KASVGKSIKTGEVVSIPSHCVVVFRPSKRLKSAVRGYRSGEVGAD
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagagttaggagaacgcggtctttcgttgtcgatgcactttgtgacgaggtggat
ttgagccgtcgccatgtcgcgagggttgttgatagctttgtctctgtggtaaccgctgca
ttggaacggggggagacagtcgagctgagggattttggggtgtttgagtctcgcgtgcgt
aaggcttccgtcgggaagagcataaagacaggggaggtggtctctattccaagtcattgt
gtggtagtgttccgccccagcaagcgtttaaagagtgcggtgcggggatatcgttcgggg
gaggttggtgcggattga
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