Treponema pallidum subsp. pallidum DAL-1: TPADAL_0805
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Entry
TPADAL_0805 CDS
T01748
Symbol
rnb
Name
(GenBank) putative exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tpu
Treponema pallidum subsp. pallidum DAL-1
Brite
KEGG Orthology (KO) [BR:
tpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpu03016
]
TPADAL_0805 (rnb)
Enzymes [BR:
tpu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TPADAL_0805 (rnb)
Transfer RNA biogenesis [BR:
tpu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TPADAL_0805 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AEZ61133
LinkDB
All DBs
Position
complement(875596..877698)
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AA seq
700 aa
AA seq
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MELHVGSPVLYRKRPACVHAIERGKDAKITIETEHGLRRVRVKDVLLLHPGTVSSLVELL
SASHIARISEESVQDAREFFGTEAPSFFELAELLWGASAAQSWAYWEQSVQSAYFVCNEP
AAAVRIRSQQECASCAVQEEKKEARQALKQAFIQELRRVARSARNMAPTAQEGMHRVHVS
QVNEQFTPFLQEIEAFALGHANRCKILQCALGCEHREQAHEILLHFGFWPVYRNPYPDRL
CPLFLSPAHVSGSDGERAAQQDVHTHRCVTQARTDCTHLAAYAIDGEGTRDPDDAISFDG
TYFWIHVASPAELVLPDSHADACARTRGASLYLPEGAVRMLSDVVVDTCALARDAVSPAL
SFKILLDEHGDISCVHVLRSMVRVTRLSYAEADSQRDTPALQPLFDFARNNIARRKGRGA
VDICFPDVHMRVDFPVQETGQAGKEMNAGDVPDTQGKVPRVHIEAQQSYESMSMVREFML
LAGEAAARFAFLHNLAFPYVSQERPQLPVQLPAGLAGEYKKRRAMKARRVSTTAAVHAAL
GLSQYSQVTSPLRRYVDLLAHQQLLACIDHAYAKAPAVGSAQTNETLALKLAQADEAARQ
ATQAERVSRRHWTLVYFLMHPHTRYEAIVLEPLQPRAHVWLPAVALEADVALGRQAQFNE
RVMLRVVRVRLATLEVHFSVCEHCHRGVTQAVEGEAEQPS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaactacatgtggggagtccggtgctctatcgaaagcgccctgcgtgtgtacacgct
atcgagcgagggaaggatgcgaagatcaccattgaaaccgaacacgggttaagacgcgtg
cgcgtgaaagacgttttgctcttgcacccgggcactgtttcttccctggtagaactattg
tctgcgtctcacattgcgcgtataagcgaggaatccgtacaggacgcgcgcgagtttttc
ggtaccgaagctccttccttttttgaacttgcagagctcctctggggggcttctgccgcg
cagtcgtgggcctattgggagcaaagtgtgcaaagtgcgtattttgtttgcaatgagcct
gccgccgcagtgcgcatccgctctcagcaagagtgcgcatcctgcgcagtgcaggaagaa
aaaaaggaagcgcgtcaggcgttaaagcaggcgttcatccaggagctacggcgcgtcgca
cgaagtgcacgcaatatggcaccaactgcgcaggaaggaatgcatcgtgtgcacgtgtcg
caggtgaacgagcagtttacgccctttctgcaggaaatcgaagcgttcgcgttggggcac
gcgaatcgctgtaagattttgcagtgtgccttaggctgcgagcacagggagcaagcgcat
gaaatactcttgcacttcgggttctggccggtgtatcgcaatccgtatcctgatcgtctg
tgtcctctatttttaagtcctgctcatgtgtctggttctgatggagaacgtgcggcgcag
caagatgtgcacacacataggtgtgtcactcaagcacgcacagattgtacgcatcttgcc
gcgtatgccatcgatggggagggtacgcgcgaccctgacgatgcgatcagtttcgatggt
acgtatttttggatccatgtagcgagccctgcagagctcgttcttcctgattcgcacgca
gatgcatgcgcacgtacacggggtgcttcgctctatttgcctgaaggcgcagtgcgcatg
ctcagcgacgtggtggttgatacgtgtgcactcgcgcgcgacgcagtttctcctgcactg
tcttttaaaattttacttgatgagcacggtgacatcagctgtgtgcacgtgctccggagc
atggtgcgtgttacgcgcctttcctatgcggaggcggattcccagcgcgatacccccgcg
ttgcagcctctttttgactttgcgcgcaacaacattgcacggagaaaagggcgcggcgca
gtggacatttgctttcctgatgtccacatgagggtagattttcctgtgcaagaaacaggg
caagcgggaaaggaaatgaacgccggggacgtgcccgatacacagggaaaggtgccgcgt
gttcacattgaagcacagcagtcgtacgagtctatgagcatggtgcgtgaattcatgctc
ttagcgggagaagcggcagcacggtttgcctttctacataaccttgcctttccttatgtg
agtcaggaacgtcctcagctgcccgtgcaactaccagcgggattggcgggggagtacaaa
aagcggcgcgcgatgaaagctcgtcgcgtgagcacaaccgccgcggtgcacgcagcactc
gggctgtctcagtacagtcaggtgaccagtcctttgcgtcgctatgtggatttgcttgcg
catcaacaattactggcgtgtattgatcacgcgtatgcaaaagctcctgctgtaggaagt
gcacagacaaacgagacgcttgcgctcaagcttgcgcaggcagatgaggcagcgcgccag
gccacacaagcagagcgtgtatcgcgtcgtcactggacgctcgtatactttttgatgcac
ccacacacgcggtacgaagcgattgtgttggagccactgcaaccgcgtgcacacgtgtgg
ttacctgctgttgctcttgaggcggatgtagcattaggtcggcaggcgcagttcaacgaa
cgcgtaatgctccgtgtcgtgcgtgtgcgccttgccacgttagaagtacatttttctgtc
tgcgagcactgtcaccgcggcgtgacgcaggctgtagaaggtgaggcggagcagccctca
taa
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