Treponema pallidum subsp. pallidum DAL-1: TPADAL_0886
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Entry
TPADAL_0886 CDS
T01748
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tpu
Treponema pallidum subsp. pallidum DAL-1
Pathway
tpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPADAL_0886 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpu03019
]
TPADAL_0886 (pnp)
03016 Transfer RNA biogenesis [BR:
tpu03016
]
TPADAL_0886 (pnp)
Enzymes [BR:
tpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TPADAL_0886 (pnp)
Messenger RNA biogenesis [BR:
tpu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TPADAL_0886 (pnp)
Transfer RNA biogenesis [BR:
tpu03016
]
Prokaryotic type
tRNA degradation factors
TPADAL_0886 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
AEZ61217
LinkDB
All DBs
Position
complement(964886..966994)
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AA seq
702 aa
AA seq
DB search
MKHSITGTIGDHPLLLESGYLARQANGSVYLQCEGTAILATVCSSAQRQEGLDYVPLTVD
FNEKYYAVGKMPGGFIKREGRPKDREILISRLIDRPMRPLFEKEFGRDIHVVPTCISSDM
VHPHDVLAIVASSAAVTLSDIPFHGPVAAVRVAYLNGSYVINPTFSQIDAASMEVVVAGT
RQGITMVEGGAREVSEDLMLGALEQAQEHIKALCDMQERLRGLCGKEKQTVIPSSAQLVG
RDRIYELAYPRLAQALYAQGKGERRSACDAVKRDVAQQYAAQLENDVQRRLFDALFHEME
YEILRLNILDRGLRIDGRAIDAIRPIACEVGVLPRPHGSAVFTRGETQSLAVVTLGAMSD
GQVYDDIEGDRRENFILHYNFPPFSVGEIGRMGVGRREIGHGCLAHRSLSAVIPDPEQFP
YTVRVVSEILESNGSSSMATVCSGTLSLLHAGVPIKKPVAGIAMGLITDGVRYAILSDIL
GEEDHLGDMDFKVAGTCDGITGFQMDVKVEAVSASLMKEALQQARVGRLHILSVMNQTIS
APSVHISRYAPHIESFKIAVEKIGALIGPGGKTVKSLSDQYRVTINTDSDGTVTVSGRDA
QSVFDAKVAVVGLTEDPRVGRVYQGVVKRIVEFGAFVEIFPGKEGLCHVSKLSRSRVSKV
SDVLQEGQRICVKLIDIDRMGRLNLSYIDALEGKSGGLDTTK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacagcataaccggcactattggggaccacccccttctccttgaaagtgggtat
ctggcgcggcaagcgaacgggtccgtgtatttacagtgtgaaggtacggcgattctcgcg
accgtatgctcctctgctcagcgacaggaagggctcgactatgtcccgctcactgttgac
ttcaacgaaaagtattatgcggtggggaagatgcctggcggcttcatcaagcgtgaaggc
cgtccgaaagacagagagattctcatttcgcgcctcattgatcgtccgatgcggccgctc
tttgaaaaggagtttggacgtgatatacacgttgtccctacgtgcatatcgtcggatatg
gtccatcctcatgacgtcttggctattgttgccagttcagctgccgttactctttcggat
atccccttccatggaccggttgctgcagtccgcgttgcatatctgaacggttcctatgtt
attaatcctaccttttctcagattgatgccgccagtatggaggttgtcgttgcaggcact
aggcagggcattaccatggtggaaggtggtgcgcgagaggtgtccgaggacctcatgctc
ggcgcgctcgaacaggcacaagagcatattaaagccctttgcgatatgcaggagcgtctg
cgtggactgtgtggcaaggagaaacagacggttatcccttcttctgcgcagcttgtaggt
cgcgatcgtatttatgagctcgcctatccgcgtcttgcgcaggctttgtatgcacagggg
aagggtgagcggcgcagtgcctgcgacgcggtgaagcgtgatgttgcacagcagtatgct
gctcagcttgagaacgatgtgcagcgcaggttgttcgacgcgttgttccacgagatggag
tatgagatactacggctgaacattcttgacaggggtttgcgcatcgatggccgtgccatt
gatgccattcggcccatcgcctgtgaggtcggggtgttgccgcgtccgcatgggtctgcg
gtgtttacccggggggagactcaatcgctcgcggtggtcacgctcggtgctatgtcggac
gggcaagtgtacgacgacatcgaaggggatagacgggagaattttatccttcactataat
tttcctcctttttcagtgggggaaatagggagaatgggggttggtcggagggagattggg
cacgggtgtctagcgcatcgttccctctcggcagtcattccggatccagaacagtttcct
tacaccgtgcgtgtggtttcagaaattttggagtcgaatggatcttcctccatggcgact
gtgtgctcagggacgctttctcttctccatgcaggggtcccaatcaaaaagcctgttgcg
ggaatcgcgatggggctcatcaccgatggcgtgcgatatgcgattctttcggatattttg
ggtgaggaggaccatctcggtgatatggatttcaaggtagcaggtacgtgtgacggcatt
accggttttcagatggatgtgaaggtagaggcggtgtctgcgtctctgatgaaggaggct
ttgcagcaagctcgtgtaggtaggctccatattctttctgtcatgaatcagacaatcagc
gcaccgagcgtgcacatttctcgctatgcgccgcatattgagagttttaaaatagcggtt
gaaaaaatcggcgcgctcatcggtcctggggggaaaaccgttaagtcgctttctgaccag
tatcgggtgactatcaacactgatagtgacggtaccgtaaccgtctccggaagggatgcg
cagtccgttttcgacgcaaaggtcgccgtggtgggccttactgaagatcctcgggtaggg
agggtgtatcagggtgtagtgaaacgaatcgtagagttcggtgcttttgtggagatcttt
ccagggaaggaaggactctgccacgtttcaaagctgtcgcgcagccgcgtgtccaaagtc
agcgatgtgctgcaagagggtcagcggatatgtgtgaagttgattgatatcgacaggatg
ggtcgtttgaatctttcctatatcgatgctcttgaggggaagtctggaggtctggacacg
acgaaatga
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