Treponema pallidum subsp. pallidum DAL-1: TPADAL_1018
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Entry
TPADAL_1018 CDS
T01748
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tpu
Treponema pallidum subsp. pallidum DAL-1
Pathway
tpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPADAL_1018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpu03019
]
TPADAL_1018
Messenger RNA biogenesis [BR:
tpu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TPADAL_1018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KhpA-B_KH
HDOD
KH_2
UPF0767
Motif
Other DBs
NCBI-ProteinID:
AEZ61357
LinkDB
All DBs
Position
1111884..1113398
Genome browser
AA seq
504 aa
AA seq
DB search
MTTSIVIGVVLVTVGLTFGWTIRWLYARFHLSACEQRAERILQEAQKEAESKKKSILLEA
KEYVLRERNQQERDDRDRRAELQRAERRLLQKEEALSTRAGELDSRERSLKQRDQSLCQE
EARYRQELERVSGLTQNQARDLIIKNLENEAKHDAQALINKIEEDAALNAERRARDILVT
TMQRITADVTGDVTVSTVNLPSEEMKGRIIGREGRNIRALETLTGADVVVDDTPEAVVIS
CFDPVRKEIARISLERLVLDGRIHPARIEEIVQKVTQEVSQKIYEEGEKVLFDLGIHDMC
PEGVRALGRLYFRTSYGQNVLYHSKEVALLASMLASEIGADVAIAKRGALLHDIGKGVET
DSDRNHAEIGMEMARKMNEDPRVVNAVGSHHNDIEPCCVESWLVQVADAISAARPGARRE
MVDHYVKRLENLEAIAEGFSGVEKAYAIQAGRELRVLVNNDKIPDRDVKALGRDIAKKIE
SDLKYPGRIRVTLIRETRVVEYAR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgtctattgtgatcggtgttgtccttgttactgtcggtttaaccttcggatgg
accattcgctggctctacgccagatttcacttatccgcctgtgagcaacgtgcagaacgt
atcctccaggaggcacaaaaagaagctgaatccaaaaagaaaagcattctccttgaagca
aaagaatatgtccttcgcgaaagaaatcagcaggaacgagacgacagagaccgaagagct
gagctgcagcgtgcagagcgacgccttcttcaaaaagaggaagccctctctacgcgcgcg
ggggagcttgattctcgagaacgatcgctaaaacagcgggatcagtccctctgtcaagaa
gaggcccgctatcgccaggagctcgagcgtgtctctggcctcactcagaatcaggcacgg
gatctcatcatcaaaaaccttgagaacgaggcgaagcacgacgcacaggctctcatcaac
aagatagaggaggacgcggctttgaacgctgagcgtcgcgcgcgcgacatcctcgttact
accatgcagcgtattactgctgatgtcaccggtgatgtgaccgtctctacggtgaatcta
cccagtgaagaaatgaaaggacgcatcattgggcgcgagggacgtaatatccgcgcgtta
gagacactcactggtgctgacgttgtcgtagatgacacacctgaagctgtcgtcatttcc
tgtttcgacccggtacgcaaagagattgcgcgcatctctcttgagcgtcttgtacttgac
ggtcgaatccatccggcgcgcattgaggaaattgtgcagaaggtgacgcaggaagtttct
caaaaaatctatgaggaaggggagaaagtgctgtttgacctcggtattcacgatatgtgt
cccgagggggtacgggcactggggcgcctgtatttccgtacaagctacggacagaatgta
ctctaccactcaaaggaggtggctctgctcgcttccatgctcgcctcggaaatcggcgca
gatgttgccattgccaaaaggggcgcgttgctgcacgatattggcaagggagtggaaact
gattcagaccgcaaccacgcagaaattggtatggagatggctcgcaaaatgaatgaggac
ccgcgagtggtaaacgccgttggttctcaccacaacgacatagagccgtgttgtgttgag
tcttggctcgttcaggtagctgatgctatctctgctgcgcgtcctggtgctcggcgtgaa
atggtggatcactacgtcaagcgtctagaaaacctcgaggcgattgctgaggggttctcg
ggtgtagagaaagcctacgctattcaggccgggcgcgagttgcgtgttttagtgaacaac
gataaaatccccgacagggacgtgaaggcacttggacgtgacatcgcaaagaaaatagag
agcgacttgaagtatcctgggcgtatccgggtcactcttattcgagaaacgcgcgtcgtg
gagtatgcccgctga
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