Tsukamurella pulmonis: TPB0596_00130
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Entry
TPB0596_00130 CDS
T08311
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tpul
Tsukamurella pulmonis
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpul03032
]
TPB0596_00130 (gyrA)
03400 DNA repair and recombination proteins [BR:
tpul03400
]
TPB0596_00130 (gyrA)
Enzymes [BR:
tpul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TPB0596_00130 (gyrA)
DNA replication proteins [BR:
tpul03032
]
Prokaryotic type
DNA Topoisomerases
TPB0596_00130 (gyrA)
DNA repair and recombination proteins [BR:
tpul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TPB0596_00130 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Nnf1
Motif
Other DBs
NCBI-ProteinID:
BDD80250
LinkDB
All DBs
Position
14060..16561
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AA seq
833 aa
AA seq
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MTDTTPPTETGGHDRIEPVDIQQEMQRSYIDYAMSVIVGRALPEVRDGMKPVQRRILYAS
YDAGYRPDRSYVKSAKPVAETMGNYHPHGDSAIYDALVRLAQPWSLRYPLIDGQGNFGSP
GNDPAAAMRYTEARLTPLAMEMLRDIDEETVDFTPNYDGKTQEPTVLPARVPNLLMNGSG
GIAVGMATNIPPHNLRELADAIFWCLENFDADSEATLEACMERIKGPDFPTSGLIVGSQG
IKDAYSTGRGSIRMRGVVEVEEDSKGATELVITELPYQVNPDNLVLSIAEQVRDGKIAGI
SKIEDQSSDRVGMRIVVRLKRDAVAKVVLNNLYKHSQLQTSFGANMLSIVDGVPRTLRLD
QMIRYYVTHQLDVIVRRTRFRLRKAEERAHILRGLVKALDALDEVIALIRRSETTEIARA
GLIELLDVDELQANAILDMQLRRLAALERQKIIDQLAEIELEIADLKDILERPERQRAIV
RDELGEIVEKFGDDRRTRIIAADGDVTDEDLIAREDVVVTITETGYAKRTKTDLYRSQKR
GGKGVKGADLKQDDIVAHFFVCSTHDWILFFTTKGRVYRAKAYELPEQSRTARGQHVANL
LAFQPEERIAQVIQIKNYDDAPYLILATKNGLVKKSKLEDFDSNRSGGIVAINLRDEDEL
VGAVLASSEDDLLLVSKNAQSIRFHATDDALRPMGRATSGVQGMRFNGDDQLLALNVVQD
DTYLLVATSGGYAKRTAMEDYPVQGRGGKGVLTIQFDPKRGELVGALIVDDETELYAITS
GGGVIRTAARQVRKAGRQTKGVRLMNLAEGTTLLAIARNADESDEPEQADGEA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccaccccgcccaccgagaccggtggccacgaccggatcgaaccggtcgac
atccagcaggagatgcagcgcagctacatcgactacgccatgagcgtgatcgtgggccgc
gcgctgcccgaggtgcgcgacggcatgaagcccgtgcagcgccgcattttgtacgcctcc
tacgacgccgggtaccggcccgaccgcagctacgtgaagtcggccaagccggtcgccgag
accatgggcaactaccacccgcacggcgacagcgcgatctacgacgccctcgtgcgtctc
gcgcagccgtggtcgctgcggtacccgctgatcgacggccagggcaacttcggctcgccg
ggtaacgatcccgcggccgccatgcgttacaccgaggcccgcctgacgccgctggcgatg
gagatgctgcgcgacatcgacgaggagaccgtcgatttcacgccgaactacgacggcaag
acgcaggagccgacggtgctcccggcgcgcgtgccgaacctgctcatgaacggctccggc
ggtatcgccgtgggcatggcgaccaacatcccgccgcacaacctgcgcgagctcgcggac
gcgatcttctggtgcctggagaacttcgacgccgactccgaggcgacgctcgaggcgtgc
atggagcggatcaagggccccgacttcccgaccagcggcctcatcgtgggcagccagggc
atcaaggacgcctactccaccggccgcggctcgatccgcatgcgcggcgtggtcgaggtg
gaggaggactccaagggcgcaacggaactcgtcatcaccgagctgccctaccaggtgaat
cccgacaacctggtgctctcgatcgccgagcaggtgcgcgacggcaagatcgccggcatc
agcaagatcgaggaccagtcctccgaccgcgtgggcatgcggatcgtggtgcggctcaag
cgcgatgccgtcgccaaggtggtgctcaacaacctctacaagcacagccagctgcagacc
agcttcggcgcgaacatgctgtccatcgtcgacggggtgccgcgcaccctgcgcctggac
cagatgatccgctactacgtcacgcaccagttggacgtcatcgtgcggcgcacccggttc
cggctgcgcaaggccgaggagcgggcccacatcctgcgcggcctggtcaaggcgctcgac
gccctcgacgaggtcatcgccctcatccggcggtccgagaccaccgagatcgcgcgagcc
ggcctgatcgagctcctcgacgtcgacgagctgcaggccaacgcgatcctcgacatgcag
ctgcgccgcctcgcggccctcgagcggcagaagatcatcgaccagttggccgagatcgag
ctcgagatcgccgacctcaaggacatcctcgagcggccggagcgccagcgcgccatcgtc
cgcgacgagctcggcgagatcgtcgagaagttcggcgacgaccggcgcacgcggatcatc
gcggccgacggcgacgtgaccgatgaggacctcatcgcccgcgaggacgtggtcgtcacc
atcacggagaccggctacgccaagcgcaccaagacggacctgtaccgcagccagaagcgc
ggcggcaagggcgtcaagggcgccgatctcaagcaggacgacatcgtcgcgcacttcttc
gtgtgctccacgcacgactggatcctgttcttcaccaccaagggccgcgtctaccgggcc
aaggcgtacgagctgcccgagcagagccgaacggcccgcgggcagcacgtggcgaacctc
ctggccttccagccggaggagcggatcgcgcaggtcatccagatcaagaactacgacgac
gcgccctacctgatcctcgccaccaagaacggcctggtgaagaagtccaagctcgaggac
ttcgactcgaaccgcagcggcggcatcgtcgccatcaacctgcgcgacgaggacgagctg
gtgggcgcggtgctggcctcgtccgaggacgacctcctgctggtgagcaagaacgcccag
tcgatccgcttccacgcgaccgacgacgcgctgcgacccatgggccgcgcaacctccggt
gtgcagggcatgcggttcaacggcgatgatcagctgttggccctcaacgtcgttcaggac
gacacgtaccttctcgtcgcgacctcgggcggttacgccaagcgcacggcgatggaggac
taccctgtccaggggcgtggcggcaagggcgtgctgacgatccagttcgaccccaagcgg
ggagagctggtgggcgcactcatcgtcgacgacgagaccgagctgtacgccatcacgtcg
ggcggcggtgtgattcgcaccgcggcgcggcaggtccgcaaggcgggccgccagaccaag
ggcgtccggctgatgaacctggccgaaggcactacgcttttggcgatcgcccgcaacgcc
gatgagagtgacgagcccgagcaggcggacggcgaggcgtaa
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