Tsukamurella pulmonis: TPB0596_02820
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Entry
TPB0596_02820 CDS
T08311
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TPB0596_02820 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpul03400
]
TPB0596_02820 (ku)
DNA repair and recombination proteins [BR:
tpul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
TPB0596_02820 (ku)
BRITE hierarchy
SSDB
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Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BDD80519
LinkDB
All DBs
Position
292830..293642
Genome browser
AA seq
270 aa
AA seq
DB search
MRAIWTGELSFGLVNVPVKVYSAIESHDAKSHQVDAKDGVRIRYKRVREGTDDEVEFANI
ANAYESDEGETVVLSKEDIKSMPVEKHREIAVTEFVPREDVDPIMFDKPYYLEPSSKSPK
AYVLLRQALQETDRLAICTFTLRNRTRLCALRVVGNVMVLQTLLWPDEIRTPEFPALTED
VKIRPQELAMAASLIDSMATDFDPEQYEDDYQVQLHQLIEAKASGGTAFPEAPEEEAEDD
EVADLLAALKASVKNREAQPERAPRKRAAG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgatatggacgggtgagctgtcgttcgggctcgtgaacgtgcccgtgaaggtg
tactccgcgatcgagagccacgatgcgaagtcgcaccaggtggatgcgaaggacggggtc
cgcatccggtacaagcgcgtgcgcgagggcaccgacgacgaggtggagttcgcgaacatc
gcgaacgcctacgagtccgacgagggcgagacggtggtgctgtccaaggaggacatcaag
tcgatgccggtggagaagcaccgggagatcgcggtgacggagttcgtgccccgtgaggac
gtcgatccgatcatgttcgacaagccctactacctggagccctcgtcgaagtcgcccaag
gcctacgtgctgctgcggcaggcgctgcaggagaccgaccggctcgcgatctgcaccttc
acgctgcgcaaccgcacccgcctgtgcgcgctgcgcgtggtcggcaatgtgatggtgctg
cagacgctgctgtggcccgacgagatccgcacgcccgagttccccgcgctgaccgaggac
gtgaagatccggccgcaggagctggccatggcggcctcgctcatcgactcgatggccacc
gacttcgacccggagcagtacgaggacgactaccaggtgcagctgcaccagctcatcgag
gcgaaggccagcggcggcaccgccttccccgaggcgccggaggaggaggccgaggacgac
gaggtcgccgacctgctggccgcgctcaaggcgtcggtgaagaaccgggaggcgcagccg
gagcgcgctccccgcaagcgcgcggccggctga
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