Tsukamurella pulmonis: TPB0596_09090
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Entry
TPB0596_09090 CDS
T08311
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul03420
Nucleotide excision repair
tpul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPB0596_09090 (pcrA)
03430 Mismatch repair
TPB0596_09090 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpul03400
]
TPB0596_09090 (pcrA)
Enzymes [BR:
tpul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPB0596_09090 (pcrA)
DNA repair and recombination proteins [BR:
tpul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPB0596_09090 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
TPB0596_09090 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
BDD81146
LinkDB
All DBs
Position
913441..915867
Genome browser
AA seq
808 aa
AA seq
DB search
MSNPAPQQSGLRQRQPFSREKAQVERQERGQELLDGLNPQQRAAVLHEGSPLLIVAGAGS
GKTAVLTRRIAYLLAARNTHPGQILAITFTNKAAAEMRERVAALIGPRAKIMWVSTFHST
CVRILRAQAGLLPGMNSNFSIYDADDSRRLLTMIVKEMGLDAKKFAPRALATHISNLKNE
LIDPEQASADAAKTGEPFAVTVAEVYGTYQARLRGANAFDFDDLIGETVALLQSHPNVAQ
YYRRRFRHVMVDEYQDTNHAQYVLVRELVGLETDADGVEPSELCVVGDADQSIYAFRGAT
IRNIEEFERDFPNAETILLEQNYRSTQTILSAANAVISRNAGRREKKLWTDQGDGDLITG
YVADNEHDEASFVVSEIDALADRGVKYSDVAVFYRTNTAARVLEEVFIRHGVPYKVVGGV
RFYERKEVRDLVAYLRAIDNPNDTVSLQRIINTPRRGIGDRAQACLTVHAENRGGTFSTA
IEDAVDGTVAMLNPRSRNAIAAFAGLMADLRRIAADEDQDLGDLLEAVVEKTGYRAELEG
SSDPQDGARLENIEELISVAREFSAQDFTDVVVEEGAPEPGSLAAFLERVSLVADADQVP
DSEAGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDESELAEERRLAYVGITRAR
ERLYLSRAMIRATWGDPMQNPESRFLAEIPQHLIDWRRLEPKRSQFGGGSRGVFGQDRPS
WGGGGGYGGRDRSSGSDGGWTPKRAPKPSRRANKLTLAVGDRVSHDSFGLGTVTAITGAG
PMERATFDFGSSGTVTLMTFGGLPMEKL
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacccagcaccgcagcagtccggactccgccagcgccagcccttctcccgcgag
aaagcgcaggtggagaggcaggaacgcggccaggaactgctcgacgggctgaacccgcag
cagcgcgccgcggtgctgcacgagggctcgccgctcctcatcgtcgcgggtgcgggctcg
ggcaagacggcggtgctcacccggcgcatcgcctacctgctggccgcccgcaacacgcac
cccggccagatcctcgcgatcaccttcaccaacaaggccgccgccgagatgcgcgagcgc
gtcgcggccctcatcggcccccgcgcgaagatcatgtgggtctccacgttccactccacc
tgcgtgcgcatcctccgcgcccaggccggcctgctgccgggcatgaactccaacttctcc
atctacgacgcggacgattcgcgccggctgctcaccatgatcgtcaaggagatggggctg
gacgcgaagaagttcgcgccgcgggcactcgccacccacatcagcaacctcaagaacgag
ctgatcgatccggagcaggcctcggccgacgcggcgaagacgggggagccgttcgcggtc
accgtcgccgaggtgtacggcacttaccaggcccgcctgcgcggggcgaacgccttcgac
ttcgacgatctcatcggggagacggtggcgctgctgcagtcgcaccccaacgtcgcgcag
tactaccggcgccgcttccggcacgtgatggtcgacgagtaccaggacaccaaccacgcg
cagtacgtgctggtgcgtgagctggtgggcctggagaccgacgcggacggcgtcgagccc
agcgagctgtgcgtggtgggcgacgcggaccagtccatctacgccttccgcggcgccacg
atccgcaacatcgaggagttcgagcgggacttcccgaacgcggagaccatcctgctggag
cagaactaccgctccacccagaccatcctctcggcggccaacgcggtcatctcccgcaac
gccggccgccgcgagaagaagctctggaccgaccagggcgacggtgacctcatcaccggc
tacgtcgccgacaatgagcacgacgaggcgagcttcgtggtctcggagatcgacgcgctg
gcggaccggggcgtcaagtacagcgacgtcgcggtcttctaccgcaccaacaccgccgcg
cgcgtgctcgaagaggtcttcatccgccacggcgtgccctacaaggtggtcggcggcgtc
cgcttctacgagcgcaaggaggtccgcgacctcgtcgcgtacctgcgcgccatcgacaat
ccgaacgacaccgtcagcctgcagcgcatcatcaacaccccgcgccgtggcatcggtgat
cgcgcccaggcctgcctgacggtgcacgccgagaaccgtggtggcacgttcagcaccgcc
atcgaggacgcggtcgacggcaccgtcgcgatgctgaacccgcgctcgcgcaacgcgatc
gccgcgttcgcgggactcatggccgatctgcgccgcatcgccgcggacgaggaccaggac
ctcggtgacctgctcgaggccgtcgtcgagaagacggggtaccgggccgagttggagggc
tcgtcggacccgcaggacggcgcgcgcctcgagaacatcgaggagttgatcagcgtcgcg
cgggagttctccgcgcaggacttcacggacgtcgtcgtcgaggaaggtgcgcccgagccc
ggctccctggccgccttcctggagcgggtctcgctggtggcggacgccgaccaggtgccc
gacagcgaggcgggcgtggtcacgatgatgaccctgcacaccgccaagggcctggagttc
cccgtggtcttcgtgaccggctgggaggacgggcagttcccgcacatgcgcgccctgggc
gacgagtccgagctcgccgaggagcggcgcctcgcctacgtgggcatcacccgcgcccgc
gagcgcctctacctctcccgcgcgatgatccgcgcgacgtggggcgatccgatgcagaac
cccgagtcgcggttcctcgcggagatcccgcagcacctcatcgactggcgccgcctggag
ccgaagcgcagccagttcggcggcggctcccgcggcgtcttcggccaggaccgcccgtcg
tggggcgggggcggcggctacggcggtcgggaccggtcctcgggctccgacggtggctgg
acccccaagcgggcgcccaagccctcgcgccgggcgaacaagctgacgctcgccgtcggt
gaccgggtctcgcacgactcgttcggcctcggcaccgtcaccgcgatcaccggcgcgggc
ccgatggagcgcgccaccttcgacttcggctcgtcgggcaccgtcaccctgatgaccttc
ggcggcctgccgatggagaagctctag
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