Tsukamurella pulmonis: TPB0596_14150
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Entry
TPB0596_14150 CDS
T08311
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul03420
Nucleotide excision repair
tpul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPB0596_14150
03430 Mismatch repair
TPB0596_14150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpul03400
]
TPB0596_14150
Enzymes [BR:
tpul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPB0596_14150
DNA repair and recombination proteins [BR:
tpul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPB0596_14150
MMR (mismatch excision repair)
Other MMR factors
TPB0596_14150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
BDD81652
LinkDB
All DBs
Position
1388649..1390739
Genome browser
AA seq
696 aa
AA seq
DB search
MIEALDPEQQEAVLAPRGPVCVLAGAGTGKTRTITHRIAHQVSTGHVAAGQVLAVTFTSR
AAGEMRARLRSLGIGGGDGQPGVQAVTFHAAAMRQLRYFWPRAIGDTRWELLDNKFPIIG
RAARDCDLRPETDTIRDLLSEIDWAKASLVTPETYAKAVEDAGRTAPMAPGTVADVYAAY
ERRKTDQDGNRLLDFDDLILVTAAILEDNHVVAEEFRDRYRSFVVDEYQDVTPLQQQLLN
AWLGERDDLTVVGDANQTIYSFTGATPNYLLDFTRRFEDATIVRLQRDYRSTPQVVSLAN
KVIGAAQGRVAGTRLELIGQRPEGPAPIYAEVDDEPAEAKLVAKRIRELLAKGVPASEIA
ILYRINAQSAVHEAALTEAGIPYQVRGGSAFFERPEIGQAVRALMDRAGQFGGVSGTELL
TLVRGALEPLGLTEAQPDGARALERWQALGALVDLTENLGTERPGLNLAELIGELRARAE
AKHPPTMQGVTLSSLHAAKGLEWDAVFLVGLTEGSVPISQAIAKGDPEPIEEERRLLYVG
VTRAREHLHLSWALARNEGGRKTRKRTRFLDVVAGQADAGRPRLDSGPSKGKRRSSDVCR
VCGGILDTREEKLRSRCEDCPSDLNDALVEALKIWRTGQARDQQVPPYTIFSNATLFAIA
EHLPRTRAQLVRINGIGSTKIDKYGDEVLALVAEHA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaagcattggacccggagcagcaggaggcggttctcgcgccgcgcggaccggtg
tgcgtgctggcgggcgcgggtacgggcaagacccgcaccatcacgcaccgcatcgcccac
caggtgtccacggggcacgtcgccgcaggtcaggtcctcgccgtcacgttcacctcgcgc
gcggcgggggagatgcgggcgcggctgcgcagcctaggcatcggcgggggcgacgggcag
ccgggcgtgcaggccgtcaccttccacgcggccgcgatgcggcagctgcgctacttctgg
ccccgcgccatcggcgacacccgctgggagctgctcgacaacaagttccctatcatcggc
cgcgccgcccgcgactgcgacctgcggcccgagaccgacaccatccgcgatctgctcagc
gagatcgactgggcgaaggcgtccctggtcacgccggagacctacgcgaaggcggtcgag
gacgcgggtcgcaccgccccgatggcgcccggcaccgtcgccgacgtctacgcggcctac
gagcggcgcaagaccgaccaggacggcaaccgcctcctggacttcgacgatctgatcctg
gtcacggccgcgatcctcgaggacaaccacgtcgtggcggaggagttccgcgaccgctac
cgcagcttcgtcgtcgacgagtaccaggacgtcacgcccctgcagcagcagctcctcaac
gcctggctgggcgagcgcgacgacctcacagtggtgggcgatgcgaaccagaccatctac
tccttcaccggcgccaccccgaactacctgctcgacttcacccgccggttcgaggacgcc
accatcgtgcggctgcagcgcgactaccgctccaccccgcaggtggtctcgctcgccaac
aaggtgatcggcgcggcgcagggccgcgtggccggtacccgcctcgagctcatcggccaa
cgccccgaggggcccgcgccgatctacgccgaggtcgacgacgagccggccgaggcgaag
ctcgtcgccaagcggatccgcgaactgctcgccaagggcgtccccgcgagcgagatcgcc
atcctctaccggatcaacgcccaatcggccgtgcacgaagccgcgctcaccgaggcgggc
atcccgtaccaggtgcgcggcggcagtgccttcttcgagcggcccgagatcggtcaggcc
gtgcgcgcgctcatggaccgcgcgggccagttcggcggcgtctcgggcaccgaactcctg
acgctcgtccgcggcgcactcgagccgctggggctcacggaggcgcagcccgacggtgcc
cgtgccctggagcggtggcaggcgctcggcgccctcgtcgacctcacggagaacctcggg
acggagcggccggggctgaacctcgccgagctgatcggcgagcttcgcgcccgggccgag
gccaagcatccgcccacgatgcagggcgtcacgctctcgtcgctgcacgcggcgaagggc
ctggagtgggacgcggtgttcctggtcggcctcaccgagggctcggtgccgatctcgcag
gccatcgccaagggcgaccccgagccgatcgaggaggagcggcggctgctctacgtgggt
gtcacccgcgcccgcgagcacctgcacctgtcgtgggcgctcgcccgcaacgagggcggg
cgtaagacgcgtaagcgcacccgcttcctcgacgtggtcgccggccaggcggatgcgggc
aggccccggctcgattcggggccgagcaagggcaagcgccgctcctcggacgtctgccgg
gtgtgcggcggcatcctcgacacccgcgaggagaagctccgctcgcggtgcgaggactgc
ccttcggacctcaacgacgcgctggtggaggcgctgaagatctggcgcaccggtcaggcc
cgcgaccagcaggtcccgccgtacacgatcttctccaacgccacgctgttcgcgatcgcc
gagcacctgccgcgcacccgagcgcagctggtgcggatcaacggcatcggctcgacgaag
atcgacaagtacggcgacgaggtgctcgccctcgtcgccgagcacgcctga
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