KEGG   Tsukamurella pulmonis: TPB0596_15130
Entry
TPB0596_15130     CDS       T08311                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
tpul  Tsukamurella pulmonis
Brite
KEGG Orthology (KO) [BR:tpul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpul03021]
    TPB0596_15130
Transcription machinery [BR:tpul03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     TPB0596_15130
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_Crp_2 Sigma70_ECF HTH_24 HTH_3 MarR GntR KORA MarR_2 HTH_10 DUF7343 GerE DUF134 HTH_Tnp_4 HTH_31 HTH_37 HNH_repeat HTH_28
Other DBs
NCBI-ProteinID: BDD81750
LinkDB
Position
1488153..1488881
AA seq 242 aa
MAVILQAGRRDGGERAAAARDEVITRCLPLAENLARRFVGRGEPYDDLVQVARVGLVNAV
DRFDPDKGTDFLSFAVPTMLGGLRRHFRDTGWATRVPRRMQEIHLRMNAAIAEAAQDLGR
TPTYRELAERMEVGLDEVREAALAGNGYRARSIDQPVGGDDDRSAPAERIGENDPGFELV
DEYASLRPAVERLDERERTVLALRFYRSMTQSEIAARLGISQMHVSRILGRALDRLRAHV
AD
NT seq 729 nt   +upstreamnt  +downstreamnt
gtggcggtgatcctgcaggccgggcgacgtgacggcggcgagcgcgcggccgcggccagg
gacgaggtcatcacccgatgccttccgctcgcagagaatctcgcccggcgattcgtcggg
cgcggcgagccctacgacgatctcgttcaggtggcccgcgtaggcctggtcaatgcggtc
gatcgcttcgatccggacaaggggaccgatttcctgtccttcgccgtgcccaccatgttg
ggtggtctgcggaggcacttccgtgacacgggatgggccacccgggtcccgcgtcgcatg
caggagatccacctgcgcatgaacgcagcgatagcggaggcggcacaggacctcggccgt
acgccgacgtaccgagaactcgcggagcgcatggaggtcggcctggacgaggtccgggag
gcagcgctggccgggaacggctaccgggccagatcgatcgatcaaccggtcgggggcgac
gacgaccggtccgcgccggcggagcggatcggggagaacgacccgggcttcgaactcgtc
gacgaatacgcgtcgttgcgccccgcggtcgagcgactcgacgagcgtgagcggacggtg
ctcgctctgcggttctaccggtcgatgacgcaatcggagatcgccgcacgcctggggatc
tcacagatgcacgtctcgcggatcctcggccgcgcgctggaccggttgcgcgcccacgtc
gccgactga

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