Tsukamurella pulmonis: TPB0596_16670
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Entry
TPB0596_16670 CDS
T08311
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul03030
DNA replication
tpul03430
Mismatch repair
tpul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPB0596_16670
03430 Mismatch repair
TPB0596_16670
03440 Homologous recombination
TPB0596_16670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpul03032
]
TPB0596_16670
03400 DNA repair and recombination proteins [BR:
tpul03400
]
TPB0596_16670
Enzymes [BR:
tpul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPB0596_16670
DNA replication proteins [BR:
tpul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPB0596_16670
DNA repair and recombination proteins [BR:
tpul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPB0596_16670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DUF6282
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BDD81904
LinkDB
All DBs
Position
1643766..1644767
Genome browser
AA seq
333 aa
AA seq
DB search
MGAVVDSARVHVVIGTEGLLVERAVSAIVEAARASAGDGGMGLPGGAGDAVPVTRIRAGD
VDQSELVELLSPSLFAEERIVVLESAGEAGKAPVDLIVEAAKNPPDGITLVIEHSGGGRA
KSMVAALKKAGAEMVEVPTITSARDRADFAKSEFRAQKVRVSDELVDLLVDSVGKDLREL
AAAIAQLVADTGGRVDLAAVHRYYAGRAEVTGFEIADKAVAGQVAAALESLRWAQHRGTP
HVLIADALADAVHSVARIRGLGRTPDQYRDAGELGMAPWKVKKMTQVARRWRAENVAGAL
QAVAAANADVKGQAADPDYALEIAVRRVATLAN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgtggtggacagcgcgcgcgtacacgtggtgatcgggacagaggggctcctc
gtggagcgggcggtctcggcgatcgtcgaggcggcgcgggcctccgcgggcgacggcggc
atggggctgccgggcggagcgggtgacgccgtccccgtgacgcggatccgcgccggcgac
gtggatcagtccgagctggtggagctgctgagcccgtcgctgttcgccgaggagcgcatc
gtcgtcctcgagtccgcgggcgaggccggcaaggctcccgtcgacctcatcgtcgaggcg
gcgaagaacccgccggacggcatcaccctggtgatcgagcacagcggcggcggccgggcg
aagtcgatggtcgcggcgctgaagaaggccggggcggagatggtcgaggtgcccaccatc
acctccgcgcgcgaccgggcggacttcgccaagtcggagttccgcgcgcagaaggtgcgc
gtctccgacgaactggtggacctgctcgtggactccgtgggcaaggatctgcgtgagctg
gcggcggcgatcgcgcagctcgtcgccgacaccggtggccgcgtggatctcgctgccgtg
caccggtactacgcgggtcgcgcggaagtcaccggcttcgagatcgccgataaggccgtc
gccgggcaggtggcggcggcgctcgaatccctgcgctgggcgcagcaccgcggcaccccg
catgtgctcatcgcggacgcgctcgcggacgcggtgcactccgtcgcccggatccgcggc
ctgggccgcacccccgatcagtaccgggacgcgggggagctggggatggcgccgtggaag
gtgaagaagatgacgcaggtcgcgcgccgctggcgcgccgagaacgtcgccggcgcgctg
caggccgtggccgcggcgaacgcggacgtcaagggccaggcggccgatccggactacgcg
ctggagatcgcggtccgcagggtcgccacgctcgcgaactga
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