Tsukamurella pulmonis: TPB0596_18300
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Entry
TPB0596_18300 CDS
T08311
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul03030
DNA replication
tpul03430
Mismatch repair
tpul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPB0596_18300
03430 Mismatch repair
TPB0596_18300
03440 Homologous recombination
TPB0596_18300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpul03032
]
TPB0596_18300
03400 DNA repair and recombination proteins [BR:
tpul03400
]
TPB0596_18300
Enzymes [BR:
tpul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPB0596_18300
DNA replication proteins [BR:
tpul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPB0596_18300
DNA repair and recombination proteins [BR:
tpul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPB0596_18300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BDD82067
LinkDB
All DBs
Position
complement(1808826..1810673)
Genome browser
AA seq
615 aa
AA seq
DB search
MFYGRAMQLSLDDCESGVVDPPLREVTFVVVDLETTGGSPRGGDAITEIGAVKVRGGEVL
GEFATLVDPGCGISPHITHLTGITTAMVTGAPRIDSVLPSFLEFAHGAVLVAHNARFDLG
FLKAAAAATGTPWPKPASLCTVQLARRVLTRDEAPSVKLSELARLFRTETTPNHRALDDA
RATVEVLHGLIGRVGNLGIHTLGELRGHLPSVTPQQRAKRHLADPLPERPGVYLFRGPGN
EVLYVGTSGNLRRRVRSYFTSGETRGRIKEMVGLAERVDHVECAHALEAAARELRLIAAH
TPPYNRRSKYPKRGWWICLTAEAFPRLAVKRSAPAGAACIGPVRSRTDAADLAELLAEAC
GLRTCTTRLRAGALHACALGPDGARPLGGCQAAVATPEPAALYRPRADLAAAALTGRSSD
VFDALEERLAVLAEKEFFESAARLRDRTARLVEAVARAHALAGFADVPELSIAHPDGSGG
WELSIVRHGRLAAAGVAPRGVPPMPVFERLRAGAESVYETGGDPLAAPDVPDALFPADVL
HGASPEEALLLRRWALRPGTRIVDVQGAWGEPLHGAGRWIEWAARASEAGRDARAAAAHP
RGAARQYSEEATHAA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtgttctacggtcgcgccatgcagctgagcctggacgactgcgagtcgggcgtcgtcgac
ccgcccctgcgggaggtgaccttcgtcgtggtcgatctggagaccaccggcggatcaccc
cgcggcggcgatgcgatcaccgagatcggcgcggtcaaggtgcgcggcggcgaggtcctg
ggagagttcgccacactggtcgatccgggctgcgggatctccccgcacatcacccacctc
accgggatcaccaccgcgatggtcaccggcgcgccccggatcgattccgtcctcccgtcc
ttcctcgagttcgcgcacggcgccgtcctggtcgcccacaacgcccggttcgacctcggc
ttcctcaaagccgccgcggccgccaccggcaccccctggccgaagcccgcctccctgtgc
accgtgcagctggcccggcgcgtgctgacgcgggacgaggcgccgtcggtcaagctcagc
gaactcgctcgcctgttccgcaccgagaccacgccgaaccaccgcgcgctcgacgacgcg
cgggccaccgtcgaggtgttgcacgggctgatcggacgggtgggcaacctcggcatccac
acgctcggggagctgcgcgggcacctcccgtccgtcacgccgcaacagcgcgccaagcgc
cacctcgccgacccgctaccggagcgccccggcgtgtacctgttccgcggtccggggaac
gaggtgctctacgtgggcacgtcgggcaatctgcggcgccgggtgcgcagctacttcacc
tccggggagacgcgcggccggatcaaggagatggtgggcctcgcggagcgggtggatcac
gtggagtgcgcgcacgcgctcgaggcggcggcgcgggaactgcggctgatcgccgcgcac
actcccccgtacaaccggcggtcgaagtaccccaagcgcgggtggtggatctgcctcacc
gcagaggccttcccgcgtctcgccgtgaagcgttccgcgccggcgggcgcggcgtgcatc
ggccccgtccgctcgcgcaccgacgccgccgatctggcggagctgctcgccgaggcctgc
ggcctgcgcacctgcaccacccggctgcgggccggggcactccacgcgtgcgcgctgggg
cccgacggtgcgcgtcccctcggcgggtgccaggccgccgtcgcgacccccgaacccgcg
gcgctctaccgcccgcgggcggacctcgcggcggccgcgctcaccggccgctcgtccgat
gtcttcgacgcgctggaggaacgcctggcggtgctcgccgagaaggagttcttcgagtcg
gcggcgcggctgcgcgaccgcaccgcccggctggtggaggcggtggcgcgcgcccacgcc
ctcgccggcttcgcggacgtgccggagctgtcgatcgcgcacccggacggcagcggcggc
tgggagctgtcgatcgtccgccacggccgactcgcggcggccggcgtcgcgccgcgcggg
gtgccgccgatgccggtgttcgagcggctgcgcgccggagcggaatcggtgtacgaaacg
ggcggcgatcccctggccgcgccggacgtgccggacgccctcttccccgccgacgtcctg
cacggcgccagccccgaggaggcgttgctcctgcgccgctgggcgctgcggcccgggacc
cgcatcgtcgatgtccagggtgcctggggcgaaccgctccacggcgcgggccggtggatc
gagtgggcggcccgggcgtcggaggcgggccgtgacgcccgtgcggcagcggcgcatccg
cgcggggccgccaggcaatacagtgaggaggccacgcatgccgcgtga
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