Tsukamurella pulmonis: TPB0596_18350
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Entry
TPB0596_18350 CDS
T08311
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul00061
Fatty acid biosynthesis
tpul00071
Fatty acid degradation
tpul01100
Metabolic pathways
tpul01212
Fatty acid metabolism
tpul02024
Quorum sensing
tpul04146
Peroxisome
Module
tpul_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TPB0596_18350
00071 Fatty acid degradation
TPB0596_18350
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TPB0596_18350
09145 Cellular community - prokaryotes
02024 Quorum sensing
TPB0596_18350
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tpul01004
]
TPB0596_18350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpul04147
]
TPB0596_18350
Enzymes [BR:
tpul01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TPB0596_18350
Lipid biosynthesis proteins [BR:
tpul01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TPB0596_18350
Exosome [BR:
tpul04147
]
Exosomal proteins
Exosomal proteins of breast milk
TPB0596_18350
Exosomal proteins of breast cancer cells
TPB0596_18350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BDD82072
LinkDB
All DBs
Position
complement(1814374..1816176)
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AA seq
600 aa
AA seq
DB search
MREISVPANYTIDPAATTVDVVFEAARTDPDGVRVKRLVAGTWEPVTCKQYEQEILGVAK
GLVAQGVKPGDRVALVCSTRYEWPLMDFAIWAIGAVTVPVYETSSSGQIDWILEDSDATL
LIIEGEKQAAEVAELTNLHKVQRVLQIEPKDGEKGAVETLTAEGEGVTDEQVHAGRAGVK
ADDLATLIYTSGTTGRPKGCELMHSNLMSESDAILASPFGNAIRGGSNVMFLPLAHVLAR
AVNIACFKGGAVVGHFNDTKNLVPQFSIFQPTLILSVPRVFEKVYASAQQSAVDGGKGKI
FEAAAQTAIEYSQAQDEGGAGLLLKAKHALFDKLVYGKLKAALGGNCKVAISGGAPLGAR
LGHFFRGIGVTVMEGYGLTETTAAITVNVEGAQKIGTVGRPLAGQAAKIAEDGEILLKGS
VVFRGYWRNEEATKAAIEDGWFHTGDLGSIDDDGYLSITGRKKELIVTAGGKNVSPAGLE
DALRSNPLISQAMVVGDAQPFIAALVTIDPEAFPQWKSANGKPESATVADLRNDPDLVAA
IDKAVAVANDTVSKAEAIKKVRILPEDFSEETGEMTPTMKVKRNVVSQKYADDIAEIYAK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagataagcgttcccgccaactacaccatcgaccccgcggcgaccacggtcgac
gtcgtcttcgaggcggcccgcaccgacccggacggcgtccgggtcaagcgcctcgtcgcg
ggcacctgggagccggtgacgtgcaagcagtacgagcaggagatcctcggcgtcgccaag
ggcctcgtcgcacagggagtcaagcctggcgaccgcgtcgccctcgtctgctccacccgg
tacgagtggccgctgatggacttcgcgatctgggcgatcggcgcggtgacggtgcccgtg
tacgagaccagctcgtcgggccagatcgactggatcctcgaggattccgatgcgacgctc
ctcatcatcgagggagagaagcaggccgccgaggtcgccgagctcacgaacctgcacaag
gtgcagcgggtgctgcagatcgagccgaaggacggtgaaaagggggccgtcgagaccctc
accgccgagggtgagggcgtcaccgacgagcaggtccacgccggtcgcgcgggcgtcaag
gcggacgacctcgcgacgctgatctacacctcggggaccacgggccggcccaagggctgc
gagctcatgcactcgaacctgatgagcgagtccgacgcgatcctggcctcgccgttcggc
aacgccatccgcggcggttccaacgtgatgttcctgccgctggcgcacgtgctggcgcgg
gccgtgaacatcgcctgcttcaagggcggcgcggtcgtcggccacttcaacgacaccaag
aacctggtgccgcagttctcgatcttccagcccacgctcatcctgtcggtgccgcgcgtc
ttcgagaaggtctacgcctcggcgcagcagagcgccgtcgacggtggcaagggcaagatc
ttcgaggccgccgcgcagaccgccatcgagtacagccaggcgcaggacgagggcggcgcc
ggcctgctgctcaaggccaagcacgccctgttcgacaagctggtctacggcaagctcaag
gccgcgctcggcggcaactgcaaggtcgcgatctccggtggcgctcccctgggcgcccgc
ctcggccacttcttccgcggcatcggcgtcacggtgatggagggctacggcctcaccgag
accaccgcggcgatcaccgtcaacgtcgagggcgcgcagaagatcggcaccgtcgggcgg
ccgctcgccgggcaggccgcgaagatcgccgaggacggcgagatcctgctcaagggctcc
gtcgtcttccgcggctactggcgcaacgaggaggccaccaaggccgcgatcgaggacggc
tggttccacacgggcgatctcggctcgatcgacgacgacggctacctctcgatcacgggc
cgcaagaaggagctgatcgtcaccgcgggcggcaagaacgtctcccccgccggcctcgag
gacgccctgcgcagcaacccgctgatctcgcaggcgatggtcgtcggcgatgcgcagccc
ttcatcgccgcgctggtgaccatcgacccggaggccttcccgcagtggaagtccgccaac
ggcaagcccgagtcggccaccgtcgccgacctgcgcaacgatcccgacctggtcgccgcg
atcgacaaggccgtcgccgtcgccaacgacacggtctccaaggccgaggccatcaagaag
gtgcgcatcctgcccgaggacttctccgaggagaccggcgagatgacgcccaccatgaag
gtcaagcggaacgtcgtctcgcagaagtacgccgacgacatcgccgagatctacgcgaag
tag
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