Tsukamurella pulmonis: TPB0596_19290
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Entry
TPB0596_19290 CDS
T08311
Symbol
priA_1
Name
(GenBank) putative primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TPB0596_19290 (priA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpul03400
]
TPB0596_19290 (priA_1)
Enzymes [BR:
tpul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPB0596_19290 (priA_1)
DNA repair and recombination proteins [BR:
tpul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TPB0596_19290 (priA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DUF7363
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
BDD82166
LinkDB
All DBs
Position
1915289..1917280
Genome browser
AA seq
663 aa
AA seq
DB search
MTAPGPAEAAQAAVELPIARILPLLQVSHLDREFDYLVPPDLDAQAQPGVRVRVRFSGRL
VDGYLLERLPRTEHEGRLASLHRVVSPLPVLTEPVLRLITEVGVRYAGTRADVLRLAIPP
RHARVEKTLLEQEPVAPTPPDVPEAVLGEYTHGGQFAAAAVAGRAPRAVWQALPGEDWAA
RLAELAATVVASGRTALLIVPDQTDLDRLAAACAHLDPAVLAAGLGPSARYRRWLLALLG
RARLVIGTRSAAFAPLPDLGLIVLWDDGDESLVEPRAPYPHTREVLALRAHQEGAALVIG
GFARTPESQALVEAGWAAEITAPRELVRSRSPRIAGTADSDVALARDPLARSARLPAAAF
AAAREALDAERPVLVQVPRRGYAPALSCERCRTPARCRRCHGPLEQADGGVLRCRWCAQA
DPGYRCPACGGTTVRAVIIGAMRTAEELGRAFPGAAVTVSGGATVLAEAPGGRRIVVATP
GAEPVVEGGYGAALLLDGWLLLGRADLRAAEETLRRWMNATALVAADGAVVCGADAGIRA
VQALIRWDAAGFAAAELAERAEVGFPPATHLAALDGAEVDIRAVVDAAALPDGAEVLGPV
DLPPGVRIPGASDTGPPPQRLLVRVARRDGRALAHALFQAQVGRSLRREGDPVRIQIDPL
RIG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcacccggccccgccgaggccgcacaagcggccgtcgaactcccgatcgcccgg
atcctgcccctgctgcaggtcagccacctcgatcgggagttcgactatctcgtgccgccc
gatctcgacgcccaggcgcagcccggcgtccgcgtccgcgtgcggttctcgggccggctg
gtggacggctacctgctcgagcggctcccgcgcaccgaacacgagggcaggctcgcgtcc
ctgcaccgcgtggtctcgccgctccccgtgctcaccgagccggtgctgcgcctgatcacc
gaggtcggcgtccggtacgcggggacacgcgccgacgtgctgcggctggcgatcccgccg
cggcacgcccgggtcgagaagaccctcctcgagcaggagcccgttgcgcccacgccgccg
gacgtccccgaggctgttctcggcgagtacacccacggcgggcagttcgcggcggccgcg
gtcgcgggccgggccccgcgggcggtctggcaggcccttcccggcgaggactgggcggcc
cgcctcgccgagctcgccgccaccgtcgtcgcctccggtcgtacggcgctgctgatcgtc
ccggaccagacggacctcgatcggctcgcggccgcgtgcgcgcatctggaccccgcggtc
ctcgccgcgggcctggggccctccgcgcggtaccggcgctggctgctcgccctgctcggc
cgcgcccggctcgtcatcggtacccgcagcgcggcgttcgcgccgctgcccgatctcggc
ctcatcgtcctgtgggacgacggcgacgagtcgctcgtcgagccccgcgccccctacccg
cacacgcgcgaggtgctggcgctgcgcgcgcaccaggagggcgcagccctggtgatcggc
ggcttcgcccgcacccctgaatcgcaggccctcgtcgaggcgggctgggccgcggagatc
acggcgccgcgcgagctggtgcgcagtcgctcgccccggatcgcggggacggcggactcg
gacgtggcgctcgcgcgcgatccgctggcccggtcggcgcgcctgcccgcggccgccttc
gccgccgcgcgcgaggccctcgacgccgagcgacccgtcctggtgcaggtgccgcgccgc
ggctacgcgccggcgctctcgtgcgaacggtgccggacgcccgcgcgctgccggcggtgc
cacggacccctggagcaggcggacgggggagtgctgcgctgccgctggtgcgcgcaggcc
gatccgggataccggtgtccggcgtgcggcgggacgacggtgcgggcggtcatcatcggg
gccatgcgcaccgccgaggagctcgggcgcgccttccccggggcggccgtgacggtctcc
ggcggcgcgacggtgctcgccgaggcgcccggcggtcgccgcatcgtggtcgccacgccc
ggcgccgagcccgtcgtcgagggcggctacggcgcggcgctgctgctcgacggctggctg
ctgctcggacgggccgacctgcgcgcggccgaggagacgctgcgccgctggatgaacgcc
accgcgctcgtggccgccgacggggcggtggtgtgcggcgcggacgccgggatccgcgcg
gtgcaggcgctgatccgctgggacgcggccggtttcgccgccgcggagctcgccgaacgc
gccgaggtcggcttccctccggcgacccacctcgcggcgctcgacggtgccgaggtcgac
atccgggctgtcgtggacgccgccgcgctgcccgacggtgccgaggtgctcggccccgtc
gacctgccgcccggggtgcggatcccgggcgcgagcgatacgggcccgccgccgcagcgg
ttgctggtgcgggtggcacggcgcgacggccgcgccctcgcgcacgcgttgttccaggcg
caggtcgggcggagcctgcggcgggagggcgatcccgtgcggatccagatcgacccgctg
cggatcggctga
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