Tsukamurella pulmonis: TPB0596_26530
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Entry
TPB0596_26530 CDS
T08311
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPB0596_26530 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpul03019
]
TPB0596_26530 (recQ)
03400 DNA repair and recombination proteins [BR:
tpul03400
]
TPB0596_26530 (recQ)
Enzymes [BR:
tpul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPB0596_26530 (recQ)
Messenger RNA biogenesis [BR:
tpul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TPB0596_26530 (recQ)
DNA repair and recombination proteins [BR:
tpul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TPB0596_26530 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HVO_A0261_N
TrmB
Motif
Other DBs
NCBI-ProteinID:
BDD82890
LinkDB
All DBs
Position
complement(2631541..2633637)
Genome browser
AA seq
698 aa
AA seq
DB search
MLTGERAERARRVIEALAGPDAALRGDQETAVAALLEPAARVLVVQATGWGKSAVYWVAT
ALRRAEGAGPALIVSPLLSLMRDQVAAAERAGLRAATLNSSNFEEWNAIEAALAAGEIDV
LLVSPERLANPSFGRRVLDALEGSLGLLVIDEAHAVSDWGHDFRPDYRRVSDVLTRLHPQ
TPVLATTATANARVTDDVAAQLGDATLVLRGPLARRSLQLNVLPALAPITRYAWVSQHLP
DLPGSGIVYALTVADAERLVDGVRAVHGPGYPVAAYTGKLDPDTRARLEDALRANEIKAL
IATSALGMGFDKPDLGFVVHVGSPPSPVSYYQQVGRAGRAIDHAVVALLPSESDAGVWDY
FATATIPDPQQMDRVLGALAEDESGEGLSAIALEAATGLRRTRIDLMLKQLAVDGAVERV
EGGYRATGAPWQYDAAHYEGIVATRRREADIMRAYTRGERCLMQLLTESLDDPEAAPCGR
CSVCLGHVPDGLGDPVPPDTARAVAGALRAQSQVLEPRKMWPGGVAGRKGRIQPDLAAEP
GRVLVFADAPEWTGTLGAARGGDQQAIADLGDAAVAALSRWRDQWRARPEVVASLQLTDR
PAPVEPVADRIAEVGRLDRVTLPVPRGPAPGRDASGAQEAAHWLDAIEVGAAAGSVRGRS
VLLVVDESGTGWAVTVAAARLREAGATVVLPLVVHRPA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgggagagcgggcggagcgcgcccggcgggtgatcgaggccctggccgggccc
gatgccgcgctgcgcggcgatcaggagaccgcggtcgccgccctgctcgagcccgccgcg
cgggtgctggtggtgcaggccacggggtggggcaagtccgcggtgtactgggtggccacg
gcgctgcgccgggccgagggggcggggccggcgctcatcgtctcgccgctgctgtcgctc
atgcgcgaccaggtggccgccgccgagcgggcgggcctgcgggccgccacgctcaactcg
tcgaacttcgaggagtggaatgcgatcgaggcggcgctcgccgccggcgagatcgatgtg
ctcctcgtttcgcccgagcggctcgcgaacccgtccttcggtcgtcgcgtcctcgacgcg
ctcgagggatcgctcggcttgctggtgatcgacgaggcgcacgcggtgtccgactggggg
cacgacttccgtcccgactaccgccgcgtctcggacgtgctcacccgcctgcacccgcag
accccggtactcgccaccaccgccaccgcgaacgcgcgggtcaccgacgatgtggcggcc
cagctgggcgacgccaccctcgtgctgcgcggtccgctggcacgccgctcgctgcagctc
aacgtgctgcccgccctggccccgatcacgcggtacgcgtgggtctcgcagcacctgccg
gacctgccgggatccggcatcgtctacgcgctgacggtggcggacgccgagcgcctcgtg
gacggtgtccgggccgtgcacggccccggctatccggttgccgcctacaccggcaagctg
gatccggacacgcgggccaggctcgaggacgcgttgcgcgccaacgagatcaaggccctg
atcgccacctcggccctggggatgggcttcgacaagccggacctgggcttcgtggtgcac
gtcggttcgccgccctcgccggtctcgtactaccagcaggtcggtcgtgccggccgcgcc
atcgaccacgccgtcgtcgcgctgctgccctcggaatcggacgcgggggtgtgggactac
ttcgccacggccaccatcccggatccgcaacagatggaccgggtgctgggcgccctcgcc
gaggacgagtccggggaggggctctcggccatcgcgctcgaggcggccaccggcctgcgt
cgcacccgcatcgatctcatgctcaagcaactcgcggtcgacggtgcggtggagcgcgtc
gagggcggctaccgcgccacgggcgcgccctggcagtacgacgcggcgcactacgagggg
atcgtcgccactcgccggcgcgaggccgacatcatgcgggcgtacacccgcggcgagcgg
tgcctgatgcagttgttgaccgagtcgctggacgaccccgaggccgctccgtgcggccgg
tgctccgtgtgtctcggtcacgttcccgacgggctcggcgatccggtcccgccggacacc
gcccgcgccgtggcgggcgcgctgcgggcccagagccaggtgctcgagccgcgcaagatg
tggcccggcggcgtcgcggggcgcaagggccggatccagcccgatctcgcggccgagccc
ggccgggtgctggtcttcgccgatgcccccgagtggacgggcacgctgggggcggctcgc
ggcggcgatcagcaggccatcgccgacctgggggacgccgcagtcgccgcgctctcgcgg
tggcgcgatcagtggcgcgctcggcccgaggtggtggcctcgctccagctgacggaccgc
ccggcaccggtcgagcccgtggccgaccgcatcgccgaggtcggccgactggaccgggtg
acgctgcccgtgccgcgcggcccggcaccggggcgggacgcctcgggtgcccaggaggcg
gcgcactggctggacgcgatcgaggtcggagccgccgccggatcggtgcgcggtcgttcg
gtgctgctcgtcgtcgacgaatccggcacgggctgggcggtcacggtcgccgcggcccgg
ctccgggaggccggggcgacggtggtcctcccgctggtggtgcaccgtcccgcctga
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