Tsukamurella pulmonis: TPB0596_28520
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Entry
TPB0596_28520 CDS
T08311
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPB0596_28520 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpul03019
]
TPB0596_28520 (pnp)
03016 Transfer RNA biogenesis [BR:
tpul03016
]
TPB0596_28520 (pnp)
Enzymes [BR:
tpul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TPB0596_28520 (pnp)
Messenger RNA biogenesis [BR:
tpul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TPB0596_28520 (pnp)
Transfer RNA biogenesis [BR:
tpul03016
]
Prokaryotic type
tRNA degradation factors
TPB0596_28520 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
KH_5
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BDD83089
LinkDB
All DBs
Position
complement(2836189..2838429)
Genome browser
AA seq
746 aa
AA seq
DB search
MTDNTQVEFDDDITEAVAVIDNGSFGTRTIRFETGRFAQQAAGSVAAYLDDETMLLSATS
HSKHPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVMSLDPKDLYDVVAINAASASTQIAGLPFSGPVGGVRVALIDGQWVAFP
TVEQLERAVFDMVVAGRIVSGSGKDADVAIMMVEAEATENVIELIAGGATAPTEAVVAEG
LEAAKPFIAVLCEAQKQLAAGAAKPTGEFPLFPAYQDDVFAAVEAAGAAKLNDALSIAGK
QERDNATDVVKAEVLEAVGPQFEGREGEIGAAFRSLTKKLVRQRILTDHFRIDGRGITDI
RSLSAEIAVIPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPP
YSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALSSNGSTSMGSVC
ASTMSLLNAGVPLKAPVAGIAMGLVSDEVDGQARYVALTDILGAEDAFGDMDFKVAGTSD
FVTALQLDTKLDGIPSQVLAGALGQAKDARTTILEVMAEAIDAPDEMSPYAPRITTIKVP
IDKIGEVIGPKGKTINSITEETGANISIEDDGTVFVGAADGPSAQAAIDRINAIANPQLP
KVGERFLGTVVKTTAFGAFVSLVPGRDGLVHISKLGNGKRVNKVEDVVNVGSKLQVEIAD
IDERGKISLIPVVEEQAAEAASAGEE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaacacgcaggtcgaattcgacgacgacatcaccgaagccgtcgccgtcatc
gacaacggttccttcggcacgcgcaccatccggttcgagaccggccggttcgcgcagcag
gccgccggctccgtcgccgcgtacctcgacgacgagacgatgctgctctcggccacgtcg
cacagcaagcaccccaaggagcacttcgacttcttccccctcacggtggacgtcgaggag
cgcatgtacgccgcgggtcgcatccccggctcgttcttccgtcgcgagggccgcccgtcg
accgacgcgatcctcacctgccgcctgatcgaccggccgctgcgcccgtcgttcgtcgac
ggtctccgcaacgagatccaggtcgtcgtgaccgtcatgtcgctcgatcccaaggatctg
tacgacgtggtcgcgatcaacgccgcctcggcgtcgacccagatcgcgggcctgcccttc
tccggtcccgtcggcggcgtgcgcgtcgcgctcatcgacggccagtgggtcgcgttcccg
accgtcgagcagctcgagcgcgccgtcttcgacatggtcgtcgccggccgcatcgtctcg
ggctccggcaaggacgccgacgtcgcgatcatgatggtcgaggccgaggccaccgagaac
gtcatcgagctcatcgcgggcggcgccaccgcgcccaccgaggccgtcgtggccgagggc
ctcgaggccgccaagcccttcatcgccgtgctctgcgaggcgcagaagcagctggccgcc
ggtgccgccaagccgaccggtgagttcccgctgttccccgcgtaccaggacgacgtcttc
gccgccgtcgaggccgcgggcgccgcgaagctcaacgacgcgctgtctatcgccggcaag
caggagcgcgacaacgccaccgacgtcgtcaaggccgaggtgctcgaggccgtgggcccg
cagttcgagggccgcgagggcgagatcggcgcggccttccgctcgctgaccaagaagctc
gtgcgccagcgcatcctgaccgaccacttccgcatcgacggccgtggcatcaccgacatc
cgctcgctgagcgccgagatcgccgtgatcccgcgcgcccacggcagcgcgctgttcgag
cgcggcgagacccagatcctgggcgtcaccacgctggacatggtgaagatggcgcagcag
atcgactcgctgggacccgagaccagcaagcgctacatgcaccactacaacttcccgccg
tactcgaccggtgagaccggccgcgtcggctcgccgaagcgccgcgagatcggccacggc
gcgctcgccgagcgcgccctcgtgccggtgctgccctcggtggaggagttcccctacgcc
atccgtcaggtctcggaggcgctgagctccaacggctcgacctcgatgggctcggtctgc
gcctcgacgatgtcgctgctcaacgccggcgtgccgctcaaggcgcccgtcgcgggcatc
gccatgggcctggtgtccgacgaggtcgacggtcaggcccgctacgtggccctgaccgac
atcctcggcgccgaggacgccttcggcgacatggacttcaaggtcgccggtacgtccgac
ttcgtcaccgccctgcagctggacaccaagctcgacggcatcccgtcgcaggtgctcgcc
ggcgcgctgggccaggcgaaggacgcccgcaccacgatcctcgaggtcatggccgaggcg
atcgacgcgcccgacgagatgagcccgtacgccccgcggatcaccacgatcaaggtgccg
atcgacaagatcggcgaggtcatcggacccaagggcaagacgatcaactccatcaccgag
gagaccggcgccaacatctcgatcgaggatgacggcaccgtgttcgtcggtgcggccgac
ggcccgtcggcccaggcggcgatcgaccggatcaacgccatcgccaacccgcagctgccg
aaggtgggcgagcgcttcctgggcaccgtggtcaagaccacggcgttcggcgccttcgtc
tcgctggtccccggccgcgacggcctggtccacatcagcaagctgggcaacggcaagcgc
gtgaacaaggtcgaggacgtggtcaacgtcggcagcaagctgcaggtcgagatcgccgac
atcgacgagcgcggcaagatcagcctgatccccgtcgtggaggagcaggccgccgaggcc
gcttccgctggcgaggagtag
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