Tsukamurella pulmonis: TPB0596_28530
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Entry
TPB0596_28530 CDS
T08311
Symbol
lysS_2
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TPB0596_28530 (lysS_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpul01007
]
TPB0596_28530 (lysS_2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpul03016
]
TPB0596_28530 (lysS_2)
Enzymes [BR:
tpul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
TPB0596_28530 (lysS_2)
Amino acid related enzymes [BR:
tpul01007
]
Aminoacyl-tRNA synthetase
Class II (A)
TPB0596_28530 (lysS_2)
Transfer RNA biogenesis [BR:
tpul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TPB0596_28530 (lysS_2)
Prokaryotic type
Other AARSs
TPB0596_28530 (lysS_2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
DUF3350
Motif
Other DBs
NCBI-ProteinID:
BDD83090
LinkDB
All DBs
Position
2838804..2842124
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AA seq
1106 aa
AA seq
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MWIARMMLVAAILSLLSALIRNDRSFYVADLLSVVGIPSYPSLLVVAVLTVLSGALRRRL
RAAHTVTVVLMSLQVLANIATLVIIATEEIDPDEAHHLPTYLASFVAVRYSLPGAALAAV
TSAVCLAFVIASRPRFPARLARGSRRAAIGVLAGGFVSVYLVVVALAYTFPGRGPNRLDG
TVEVLVWSLRSTFGVAVPRRLDLALNGHSGPVWIYSLAGVMSASVLILALMAFWRAGRGD
ELMTEPEELEVRRLLLEYGEDDSLGYFATRRDKAVIAAPDRRAVVTCRAVGPVSMASADP
IGHRDSWPAAVGAWIEDCRAHSLYPAVLAASAEGAQVYEEAGLRTLMIGDEAIIHVDAFT
LKGREMRAVRQAVTRVAAAGYTLKVRRHGDLSAAELAEVAELAEAWRGEETERGFSMALN
RIGDPVDGRCVLVSAHDAAGTVRGLLSFVPWGTRGLSLDLMRRDRDAENGLNEFMVATLI
EQCGELGIRRISLNFAVFRSVFSEADRVGAGPITRMVDSALSLASKFYQLESLYRSNDKY
RPDWVPRILCYDPTLTAVRAGIAVGIAEGFLPQIGPKFLAGPSIPDEVPRDPEFVDRLLA
EEERLLRREAPPVRLSEQQRVRRRKLRALEEAGMPGYPPSVPRTTSLEAVRAQDAAPPAD
GAGTVVSVTGRVRAVRDYGGVTFVDLHEDGAHLQVIAERSRTPEDARSLWRSAIDMGDLV
SVTGPVVRSRSGELSVLLTSWAMAGKCLSPVPKTRARLGDETRARNRPLELITDDGAVDL
LYRRSRAVAAMREVFTRRDYTEVETPMLQTVHGGAAARPFTTHINAYDMGLYLRIAPELY
LKRLAVGGMGRIFELNRNFRNEGADATHNPEFTALEAYEAYGDYNTMRTLTREVILAAAV
AVNGRPVAVRPDGAGGTREVDLTAEWPVIAVHAAVSAAAGTELTSASSFDEVAAVCARHR
VAVPRGATAGKLVMELYEALVEKQTEFPTFYCDFPIEVSPLARKHRDDPRLTEQWDLVGF
GAELGTAYTELTDPIDQRERLTQQSMAAAAGDPEAMELDESFLDALSYAMPPTGGLGIGV
DRIVMLLAGVNIRATLAFPFVKPQDR
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
gtgtggatcgcgagaatgatgctggtcgcggcgatcctctcgctgctcagcgcgctcatc
cgcaacgaccgctccttctacgtggccgatctgctcagcgtcgtcggcatcccgtcgtat
ccgagcctgctcgtggtcgcggtgctgaccgtgctcagcggcgcgttgcgccggcggctg
cgggccgcgcacaccgtcaccgtcgtcctgatgtcgctgcaggtcctcgcgaacatcgcg
acgctggtgatcatcgcgaccgaggagatcgaccccgacgaggcgcaccacctccccacc
tacctcgcgtcgttcgtggccgtgcgctactcgctgcccggtgccgcgctggccgccgtg
accagcgccgtctgtctggcgttcgtgatcgcctcccggccgcgcttccccgcccggctc
gcccgcggctcgcggcgcgccgcgatcggtgtgctcgccggcggcttcgtcagcgtctac
ctcgtggtcgtggcgctggcctacaccttcccggggcgcgggccgaaccggctcgacggc
accgtcgaagtgctggtgtggtcactgcgctccacgttcggcgtggccgtgccgcgacgg
ctcgacctggctctcaacggccacagcggtccggtgtggatctactccctcgccggcgtg
atgtccgcgtcggtgctgattctggcgctcatggcgttctggcgcgcgggacgcggtgac
gagctgatgaccgagccggaggagctcgaggtgcgccgcctgctgctcgaatacggcgag
gacgactcgctcggctacttcgccacccgccgcgacaaggcggtgatcgcggcgccggac
cggcgcgccgtggtgacctgccgcgccgtcggccccgtgtcgatggccagcgcggacccg
atcggacaccgcgattcctggcccgccgcggtcggcgcctggatcgaggactgccgcgcg
cacagcctctaccccgccgtcctcgccgccagcgccgagggcgcgcaggtgtacgaggag
gccgggctgcgcaccctgatgatcggcgacgaggcgatcatccacgtcgacgctttcacg
ctcaagggccgcgagatgcgggccgtgcgccaggccgtgacccgcgttgccgccgcgggg
tacacgctcaaggtccgccggcacggagacctgtccgccgcggagctcgccgaggtggcc
gagctcgccgaggcgtggcgcggcgaggagaccgagcgcggcttctccatggccctcaac
cggatcggcgatccggtggacggtcggtgcgtcctggtctccgcccacgacgccgcaggc
accgtgcggggcctgctcagcttcgtcccgtggggcacacgcggcctgtccctggacctg
atgcggcgcgaccgcgatgcggagaacgggctcaacgagttcatggtcgccacgctcatc
gagcagtgcggggagctcgggatccgccggatctccttgaacttcgcggtcttccgctcc
gtcttctccgaggccgaccgcgtcggcgcggggccgatcacccgcatggtcgactcggcg
ctcagcctggcgtcgaagttctaccagctggagtcgctgtaccgctcgaacgacaagtac
cggcccgattgggtgccgcgcatcctctgctacgaccccaccctcaccgcggtgcgggcc
ggcatcgccgtcggcatcgcggagggcttcctaccgcagatcggaccgaagttcctggcc
ggaccgtcgattccggacgaggttccgcgtgatccggagttcgtggatcggttgctcgcc
gaggaggagcgcctgctgcgccgcgaggctccgccggtgcggctctccgagcagcagcgg
gtgcggcggcgcaagctgcgggccctcgaggaggcgggcatgcccggctatcccccgtcg
gtccctcgcacgacctccctcgaggccgtgcgtgcgcaggacgccgctccacccgccgac
ggtgccggcaccgtcgtctccgtcacgggccgggtccgcgcggtgcgcgactacggcggc
gtgaccttcgtcgacctgcacgaggacggggcgcacctccaggtgatcgcggagcgctcc
cgcacccccgaggacgcacggtcgctgtggcgcagcgcgatcgacatgggcgatctcgtt
tcggtgacggggccggtggtccgctcccgctccggcgagttgtcggtgctcctgacctcg
tgggccatggcgggcaagtgcctgtcgcccgtcccgaagacgcgggcccggctcggcgac
gagacgcgggcgcgcaaccgtcccctcgagttgatcaccgacgacggtgccgtggacctg
ctgtaccggcgctcgcgggccgttgcggcgatgcgtgaggtcttcacccgtcgcgactac
accgaggtcgagactccgatgctgcagacggtgcacggcggcgccgcggcccgtccgttc
accacgcacatcaacgcctacgacatgggcctgtacctacggatcgcgccggagctctac
ctcaagcgactcgcggtcggcgggatgggccggatcttcgagctgaaccgcaacttccgc
aacgagggcgccgacgccacgcacaacccggagttcaccgctctcgaggcctacgaggcg
tacggcgactacaacaccatgcgcacgctgacccgggaggtgatcctcgccgccgcggtc
gcggtcaacggacggcccgtcgccgtgcggcccgacggtgccggcggcacccgcgaggtg
gacctcaccgccgaatggccggtgatcgccgtgcacgcggcggtctccgccgccgccgga
acggaactgacctcggcgtcgagcttcgacgaggtggccgcggtgtgcgcacgccatcgc
gtcgccgtcccccggggcgcgaccgcgggcaagctcgtcatggagctgtacgaggcgctg
gtcgagaagcagaccgagttccccacgttctattgcgacttccccatcgaggtctccccg
ctggcgcgcaagcaccgcgatgatcctcggctgaccgaacagtgggatctggtgggcttc
ggtgccgagctcggcaccgcgtacacggaactgacggacccgatcgaccagcgcgagcgg
ctcacgcagcagtcgatggcggccgccgccggcgatcccgaggcgatggagctcgacgag
tccttcctggacgctctctcctacgcgatgccgcccaccggaggcctgggcatcggcgtg
gaccgcatcgtcatgctgctcgcgggcgtgaacatccgtgccaccctggcgttccccttc
gtcaagccccaggaccgctga
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