Tsukamurella pulmonis: TPB0596_29800
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Entry
TPB0596_29800 CDS
T08311
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul02024
Quorum sensing
tpul03060
Protein export
tpul03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
TPB0596_29800 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TPB0596_29800 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TPB0596_29800 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tpul02044
]
TPB0596_29800 (ffh)
Enzymes [BR:
tpul01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
TPB0596_29800 (ffh)
Secretion system [BR:
tpul02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
TPB0596_29800 (ffh)
Eukaryotic Sec-SRP protein
TPB0596_29800 (ffh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
AAA_22
MeaB
Zeta_toxin
APS_kinase
TctA
MMR_HSR1
AAA_16
NTPase_1
nSTAND3
NPHP3_N
AAA_31
AAA_33
AAA_30
TsaE
AAA_18
ABC_tran
6PF2K
MobB
Thymidylate_kin
ATP_bind_1
DUF8572
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BDD83217
LinkDB
All DBs
Position
complement(2969953..2971521)
Genome browser
AA seq
522 aa
AA seq
DB search
MFESLSDRLTGALKDLRGKGRLTDADIDSTAREIRLALLEADVALPVVRAFVARVKERAK
GHEVSAALNPAQQIVKIVNEELVGILGGETRRLNLAKTPPTVIMLAGLQGAGKTTLAGKL
AAFLKKQGHTPMLVACDLQRPGAVDQLKIVGERAGVPTYAPHPGTSVGGEGALGVSAADP
VEVARGGIAEARAKQHDVVIVDTAGRLGIDEELMGQARAIRDAVDPDEVLFVLDAMIGQD
AVSTAQAFADGVDFTGVVLTKLDGDARGGAALSVREITGKPILFASTGEKLDDFDVFHPD
RMSSRILGMGDVLSLIEQAEQHMDQQKAEEAAAKITSGELTLEDFLDQMLMIRKMGPIGN
LLGMLPGAGQMKDALAAVDDSQLDRIQAIIRGMTPAERADPKIINASRRLRIAKGSGVTV
TDVNQLVDRFFEARKMMSQMAGFGAPKRIPKRKQKGKKGKKASGRGPTPPKMRGGFPGGM
PGMPGMPAGMDLSSMPKGLDQLPPGLEGIDMAALEEQLRKKK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaatccctctccgatcggctcacaggcgcgctcaaggacctgcgcggcaagggc
cggctgaccgacgccgacatcgactcgacggcccgggagatccgcctcgcgctgctcgag
gccgatgtcgcgctgcccgtggtgcgcgccttcgtcgcgcgggtcaaggagcgggccaag
ggccacgaggtctcggccgcgctcaaccccgcgcagcagatcgtcaagatcgtcaacgag
gagctcgtcgggatcctcggcggcgagacccggcgcctgaacctggccaagaccccgccg
acggtgatcatgctcgccggcctgcagggcgccggtaagacgaccctcgccggcaagctg
gccgcgttcctcaagaagcagggccacacgcccatgctcgtggcctgcgacctgcagcgt
ccgggcgccgtcgaccagctcaagatcgtcggcgagcgggccggcgtccccacgtacgcc
ccgcaccccggcacgtccgtcggcggcgagggcgccctgggcgtgagcgcggccgacccc
gtcgaggtggcgcgcggcggtatcgccgaggcccgggccaagcagcacgacgtggtcatc
gtcgacaccgccggccgcctcggcatcgacgaggagctcatgggccaggcccgcgcgatc
cgcgacgcggtggaccccgacgaggtgctgttcgtcctcgacgccatgatcggccaggac
gcggtgagcaccgcgcaggccttcgccgacggcgtcgacttcaccggtgtcgtgctcacc
aagctcgacggcgacgcccgcggcggcgccgcgctctcggtccgcgagatcaccggcaag
ccgatcctgttcgcctccaccggcgagaagctcgacgacttcgacgtcttccacccggac
cggatgagctcccggatcctcggcatgggcgatgtgctctcgctcatcgagcaggccgag
cagcacatggatcagcagaaggcggaggaggcggccgccaagatcacctccggcgagctg
accctcgaggacttcctcgaccagatgttgatgatccgcaagatgggccccatcgggaac
ctgctgggcatgctgcccggcgcgggccagatgaaggacgccctcgccgccgtcgacgac
agccagctcgaccggatccaggcgatcatccgcggcatgaccccggccgagcgggccgac
ccgaagatcatcaacgcctcgcgccgtctgcgcatcgccaagggctcgggcgtcaccgtc
accgacgtcaaccagctggtggaccgtttcttcgaggcccgcaagatgatgtcgcagatg
gcgggtttcggcgcgcccaagcggatccccaagcgcaagcagaagggcaagaagggcaag
aaggcctccggtcgcggcccgacgccgccgaagatgcgcggcggcttccccggcggcatg
ccggggatgccggggatgcccgccgggatggacctgtcgagcatgcccaagggcctcgat
cagctgccccccggcctggagggcatcgacatggccgcgctcgaggagcagctccgcaag
aagaagtga
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