Tsukamurella pulmonis: TPB0596_30330
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Entry
TPB0596_30330 CDS
T08311
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TPB0596_30330 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpul03400
]
TPB0596_30330 (fpg)
Enzymes [BR:
tpul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TPB0596_30330 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TPB0596_30330 (fpg)
DNA repair and recombination proteins [BR:
tpul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TPB0596_30330 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
TackOD1
DUF7573
Motif
Other DBs
NCBI-ProteinID:
BDD83270
LinkDB
All DBs
Position
complement(3025262..3026149)
Genome browser
AA seq
295 aa
AA seq
DB search
MPELPEVEVVRRGLDDHLVGRGVTAMEVLHPRAARRHVAGEADLIGQITGADVESAQRRG
KFLWLPLARGGVSADTAIVVHLGMSGQMLVDGGAVSGRSPGDDRHLRIRADLSDGAVLRF
VDQRTFGGWAVDPLVEVDGTLVPEAVAHIARDPLDPLFDRDAVIARMKRKDTEIKRVLLD
QTVISGVGNIYADEALWLSGVHGRRRASALSKPALGRLIDDATSVMRSALDQGGTSFDSL
YVNINGQSGYFARSLNAYGRDGEPCRRCGTIMQRESFMNRGSHFCPKCQPQPRNR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtcgaggtcgtccgacgcgggctggacgatcacctggtgggc
cgcggcgtcaccgcgatggaggtgctgcacccccgtgccgcacgccggcacgtcgcgggc
gaggccgatttgatcggccagatcaccggcgccgacgtggaatccgcacagcgccgcgga
aagttcctctggctgccgctggcccgcggcggcgtctccgccgacaccgccatcgtcgtg
cacctgggcatgagcgggcagatgctcgtcgacggcggtgccgtcagtggtcggagcccc
ggcgacgaccggcacctgcgcatccgggccgacctgtccgacggtgcggtgctccgcttc
gtcgatcagcgcaccttcggcggctgggccgtcgatccgctcgtcgaggtggacggcacg
ctcgtccccgaggccgtcgcgcacatcgcgcgggatcccttggaccccttgttcgatcgg
gacgctgtgatcgcacggatgaaacgcaaggacaccgagatcaagcgggtcctgctggac
cagaccgtgatctccggcgtgggcaacatctacgccgacgaggcgctgtggctctccggt
gtgcacggccggcgccgcgcctccgcgctgagcaagcccgcgctcggccgactcatcgac
gacgccacctccgtcatgcgcagcgcactcgatcagggcggcaccagcttcgactcgctg
tacgtcaacatcaacggccagtcgggctacttcgcacgctcgctgaacgcgtacgggcgc
gacggtgagccgtgccggcggtgcggcacgatcatgcagcgagagtcgttcatgaaccgc
ggctcgcacttctgcccgaagtgccagccgcagccgcggaacaggtga
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