Tsukamurella pulmonis: TPB0596_33650
Help
Entry
TPB0596_33650 CDS
T08311
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPB0596_33650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpul03021
]
TPB0596_33650
03019 Messenger RNA biogenesis [BR:
tpul03019
]
TPB0596_33650
Transcription machinery [BR:
tpul03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TPB0596_33650
Messenger RNA biogenesis [BR:
tpul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TPB0596_33650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
NACHT
Spore_III_AA
AAA_22
DUF7084
Pheromone
Motif
Other DBs
NCBI-ProteinID:
BDD83602
LinkDB
All DBs
Position
complement(3376077..3378071)
Genome browser
AA seq
664 aa
AA seq
DB search
MTDTDVTTSPETATATVSTTRADERRRSGLNGMVLAELRGIASELGIKGISGLRKGDLIA
AITEHGGAAKTAPKAAKAAAPKAEAPAETAPTTTEAPKAEAPKAEAPKNDAPADAPKNEG
RGARAPKADKAEQAPSEANAQADAPRGDGEQSQREGGQRRERNQRRERNQNGNQNQDGEN
RQQGDRQQGDRQQGENRQQGEGRQDRRQQGDRQQGENRQRGNNGPSNDQNNNGPDEGDGQ
GRRGRRFRERRRGRDRGQNDGEPQVSEDDVLQPVAGILDVLDNYAFVRTSGYIAGPNDVY
VSMNMIRRNGLRRGDAITGAVKMPRDGENNDGGNQGGGGGGRGNQSNRQKFNPLVRLDTV
NGQDVDSAKNRPEFNKLTPLYPNQRLRLETAQNILTTRVIDLIMPIGKGQRALISAPPKA
GKTTVLQDIANAIATNNPECYLMVVLVDERPEEVTDMQRSVRGEVISSTFDRPPSDHTSV
AELAIERAKRLVEGGKDVVVLLDSITRLGRAYNNSSPASGRILSGGIDSTALYPPKRFLG
AARNIENGGSLTIIATALVETGSTGDTVIFEEFKGTGNAELKLDRKISERRIFPAVDVAA
SNTRKDELIMAPDEAVVVNKLRRVLSALDSQQAIEMLISQLKKTQNNIEFLMTVQKNSGF
GDND
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacgtgaccaccagcccggagacggccaccgccactgtcagcaccacg
cgggccgatgagcggcgccgctcgggcctcaacggcatggtgctcgccgagctccgcggc
atcgcgagcgagctggggatcaagggcatctccggcctgcgcaagggcgatctgatcgcc
gcgatcaccgagcacggcggcgccgccaagaccgcgccgaaggccgccaaggcggccgcg
ccgaaggcggaggcgccggccgagaccgcacccacgaccaccgaggcccccaaggccgag
gctccgaaggccgaggcgccgaagaacgacgcccccgccgacgcgcccaagaacgagggc
cgcggcgcacgcgcccccaaggcggacaaggcggagcaggcaccgtcggaggcgaacgcc
caggccgacgcgccccgcggcgacggcgagcagagccagcgcgagggcggccagcgccgc
gagcgcaaccagcgtcgcgagcgcaaccagaacggcaaccagaatcaggacggcgagaac
cgccagcagggtgaccgccagcagggcgatcgccagcagggcgagaaccgtcagcagggt
gagggccgccaggaccgccgccagcagggtgatcgccagcagggcgagaaccggcagcgc
ggcaacaacggcccgtcgaacgatcagaacaacaacggccccgacgagggcgacggccag
gggcgccgcgggcgccgcttccgtgagcgccgccgcggccgcgaccgcggccagaacgac
ggtgagccgcaggtcagcgaggacgacgtcctgcagcccgtcgcgggcatcctcgacgtg
ctcgacaactacgccttcgtgcgcacgtcgggctacatcgccggcccgaacgacgtctac
gtctcgatgaacatgatccgccgcaacggcctgcgccgcggcgacgcgatcaccggcgcc
gtgaagatgccccgcgacggcgagaacaacgacggcggcaaccagggcggcggcgggggc
ggccgcggcaaccagagcaaccggcagaagttcaacccgctcgtccggctggacaccgtc
aacggccaggacgtggattcggcgaagaaccggcccgagttcaacaagctcacgccgctc
taccccaaccagcggctgcgcctggagaccgcgcagaacatcctcaccacccgcgtgatc
gacctgatcatgcccatcggcaagggccagcgcgcgctgatctccgccccgccgaaggcc
ggtaagaccacagtgctgcaggacatcgcgaacgcgatcgccaccaacaaccccgagtgc
tacctcatggtggtgctggtggacgagcggcccgaagaggtcaccgacatgcagcgcagc
gtgcgcggcgaagtcatcagctccaccttcgaccgcccgccgtcagaccacacctcggtc
gccgagctcgccatcgagcgggccaagcgcctcgtcgagggcggcaaggacgtggtggtg
ctgctcgactcgatcacccgcctcggccgcgcgtacaacaactcgagccccgcgtcgggc
cgcatcctctcgggcggtatcgattccacggccctgtacccgccgaagcggttcctgggc
gcggcgcgcaacatcgagaacggcggctcgctgacgatcatcgccaccgcgctcgtcgag
accggctccaccggtgacaccgtgatcttcgaggagttcaagggcaccggcaacgccgag
ctcaagctcgaccgcaagatctcggagcggcgcatcttcccggccgtcgacgtcgcggcg
tcgaacacccgtaaggacgagctcatcatggcgcccgacgaggccgtcgtggtgaacaag
ctgcgccgtgtgctctcggcgctcgacagccagcaggccatcgagatgctgatcagccag
ctcaagaagacgcagaacaacatcgagttcctcatgactgtgcagaagaacagcggcttc
ggcgacaacgactga
DBGET
integrated database retrieval system