Candidatus Thiothrix putei: QJT81_02815
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Entry
QJT81_02815 CDS
T10292
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tput Candidatus Thiothrix putei
Pathway
tput00300
Lysine biosynthesis
tput00470
D-Amino acid metabolism
tput01100
Metabolic pathways
tput01110
Biosynthesis of secondary metabolites
tput01120
Microbial metabolism in diverse environments
tput01230
Biosynthesis of amino acids
Module
tput_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tput00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QJT81_02815 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QJT81_02815 (dapF)
Enzymes [BR:
tput01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QJT81_02815 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Scramblase
Motif
Other DBs
NCBI-ProteinID:
WGZ94934
UniProt:
A0AA95KJ30
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All DBs
Position
539224..540063
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AA seq
279 aa
AA seq
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MAGGELHFTKMQGLGNDFVVLDGINQKVSLSTAHIRQIADRHFGVGCDQLLLVEAYAGDE
AEFRYRIFNADGGEVEQCGNGARCFARFVYDQGLTRNTTIPVMTASGRIVLQIQTNGLVT
VNMGVPVLEPAQIPFISAQRQTLYTLEVDGTNVALAAVSMGNPHAVLQVADIDTAPVASL
GMLLERHAAFPKRVNVGFMQVVARDQIRLRVFERGCGETLACGTGACAAMVAGRLQGLLD
EQVNVHLPGGELQIQWQGDGQPVWMTGPAVTVFRGTLTL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggctggtggcgagcttcatttcactaaaatgcagggtttgggcaatgattttgtggtg
ctggatggcattaaccaaaaggtgagcttgagcactgcgcacattcggcaaatcgctgac
cgccatttcggggtggggtgtgatcaattattattggtggaggcgtatgccggtgatgag
gccgagttccgctaccgtattttcaatgccgatggtggtgaggtggagcaatgtggcaat
ggggcgcgatgttttgcgcgtttcgtgtatgatcaaggtttgacacgtaataccacgata
cccgtcatgaccgccagcgggcgcattgtgttgcaaattcaaaccaatgggttggtaacg
gtgaatatgggtgtgccggtgttagagcctgcacaaataccatttatttctgcccagcgc
caaacgctttatacgctagaagtggatggcacaaatgtcgcgttggcagcggtgtcgatg
ggaaaccctcatgcggtgttgcaagttgctgacattgacacagcccctgtggcgtcgctg
gggatgttgttggaacgccacgctgcttttcctaagcgggtaaatgtcggttttatgcaa
gtggtggcacgcgatcagattcgcttgcgagttttcgagcgcggttgcggtgaaacgctg
gcctgtggcacgggcgcttgtgcggctatggtggcagggcgcttgcaagggctgttggat
gagcaggttaatgttcacttacccggcggtgagttgcagattcagtggcaaggcgatgga
cagccggtatggatgaccggcccggcagtaacggtatttaggggaacacttacgttatga
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