Candidatus Thiothrix putei: QJT81_06230
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Entry
QJT81_06230 CDS
T10292
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tput Candidatus Thiothrix putei
Pathway
tput03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tput00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QJT81_06230 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tput03400
]
QJT81_06230 (uvrB)
DNA repair and recombination proteins [BR:
tput03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QJT81_06230 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QJT81_06230 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
DUF87
UB2H
AAA_22
Microtub_bd
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
WGZ95581
UniProt:
A0AA95KKI5
LinkDB
All DBs
Position
complement(1205973..1207994)
Genome browser
AA seq
673 aa
AA seq
DB search
MTEQTFQIHTTYQPAGDQPEAIRSLVNGLNDGLLHQTLLGVTGSGKTFTMANIIQQTQRP
AIILVHNKTLAAQLYGEMKEFFPNNAVEYFVSYFDYYQPEAYVPSKDVYIEKDSAINDHI
EQMRLSATRNLFERKDVIIIATVSSIYGLGDPESYLKMLLILVRGDRIDQRTLLRRLAEM
QYTRNDLDLQRGTFRVRGEVIDVHPAESDKEAIRIELFDDEIENLSYFDPLTGEVLRRVP
RLTVYPKTHYVTPREVLLAAIDHIKAELKERLKVLRENDRLVEAQRLEQRTQYDIEMIVE
TGYCSGIENYSRYLSKRPAGEPPPCLFDYLPRNAIVFIDEAHVTIPQFGGMYKGDYSRKS
TLVDYGFRLPSALDNRPLRFDEFEKLIPQAIHVSATPGTYELEHSDNIAEQVVRPTGLVD
PEVEIRPIISQVDNVMSEISERAKRNERVLVTTLTKRMAEDLTDYLMEHNIKVRYLHSDI
DTVERVEIIRDLRKGEFDALIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNAEGKAILYADKITDSMRKAMDETSRRRAKQLAHNEAQGITPQTIRKRIADVMEGA
YANATKGKGKTRGEKKVAEEAAEYRSLTPDQAIKQIKKLEEKMFQHAKNLEFEQAASVRD
QIGHIRARVFGLE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacaaaccttccagatccacaccacctaccagcccgctggcgaccaaccggaa
gcgattcgctcgctggtcaatggcttaaacgacggcttgctgcaccaaaccttgctgggc
gtgaccggttcgggcaaaaccttcacgatggcgaatatcatccagcaaacccagcgcccc
gcgattattctggtacacaataaaacgctggcggcacagctttacggcgaaatgaaagaa
ttcttccccaacaatgcggtggaatacttcgtttcgtacttcgattattaccagccggaa
gcgtatgtgccgtccaaagacgtgtacatcgaaaaagattccgccatcaatgaccacatc
gaacaaatgcgcctgtctgccacccgcaacctgttcgagcgcaaagatgtcattattatc
gccacggtttcatccatttacggtctgggcgaccccgaatcgtatttgaaaatgctgctg
attctggtgcgcggcgaccgtatcgaccaacgcaccctgctgcgtcgcctcgccgaaatg
caatacacccgcaacgacctcgacctgcaacgcggtacgtttcgggtacgcggcgaagtc
atcgacgtgcatcctgccgaatccgacaaagaagcgattcgcatcgaactcttcgacgat
gaaatcgaaaacctcagctatttcgacccgctgacgggcgaagtgctgcgccgcgtgcca
cgcctcacggtttacccgaaaacgcactacgtcaccccacgcgaagtgctgttagccgcc
atcgaccacatcaaagccgaactcaaagagcgcctcaaagtcttgcgcgaaaacgaccgc
ttagtggaagcgcaacgcctcgaacagcgtacccaatacgacatcgaaatgatcgtcgaa
accggctactgttccggcatcgaaaactattcgcgctacctctcgaaacgccctgcgggt
gaaccaccgccgtgtctgttcgattacctgccacgcaatgctatcgtgtttatcgacgaa
gcccacgtcaccatcccgcaattcggcggcatgtacaaaggcgactattcccgcaaaagc
acactggtcgattacggtttccgcctgccctcggcactcgacaaccgcccgctgcgcttt
gacgaattcgagaaactgattccgcaagccatccacgtttccgccacccccggcacatac
gagctggaacattccgacaatatcgccgaacaagtggtgcgcccgactggactcgttgac
cccgaagtggaaattcgcccgatcatttcgcaagtcgataacgtcatgtccgaaatcagc
gaacgcgccaaacgtaatgagcgcgtactggtcacaaccctgaccaagcgcatggcggaa
gacctcaccgattacctgatggaacacaatatcaaggtgcgctacctgcactccgacatc
gacaccgtagagcgcgtcgaaatcatccgcgacttgcgcaaaggcgagttcgatgcatta
attggcattaacttgctgcgggaaggtcttgatataccagaagtttcactagtggcgatt
ctggatgctgacaaagaaggtttcctgcgttccgagcgctccctgattcaaaccatcgga
cgcgccgcccgcaatgccgaaggaaaagcgattttgtacgccgataaaatcaccgattcc
atgcgcaaagcaatggatgaaaccagccgccgccgcgccaaacagcttgcccacaatgaa
gcgcaggggattaccccgcaaaccattcgcaagcgcattgccgatgtcatggaaggcgct
tacgccaatgccaccaagggcaaaggcaaaacacgcggcgaaaagaaagtagcagaagaa
gcggctgaataccgcagcttaacgcccgatcaagccattaagcagatcaaaaagctggaa
gaaaaaatgttccagcacgccaaaaatctggagtttgaacaagcagcctcagtccgtgat
cagattggacacatccgcgcgcgagtcttcgggctggagtag
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integrated database retrieval system
