Candidatus Thiothrix putei: QJT81_15915
Help
Entry
QJT81_15915 CDS
T10292
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
tput Candidatus Thiothrix putei
Pathway
tput03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tput00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QJT81_15915 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tput03400
]
QJT81_15915 (recB)
Enzymes [BR:
tput01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QJT81_15915 (recB)
DNA repair and recombination proteins [BR:
tput03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QJT81_15915 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
AAA_22
ResIII
PhnH
Motif
Other DBs
NCBI-ProteinID:
WGZ93283
UniProt:
A0AA95HC14
LinkDB
All DBs
Position
complement(3101137..3104670)
Genome browser
AA seq
1177 aa
AA seq
DB search
MQTLNAQTVSLVGTNLIEASAGTGKTWTISWLYLRLIAVYGLTVDKVLVVTYTEAATAEL
RDRIRKRLADALAFLEERPHEETYEVLLTETPLHDCIQRLQLALVSFDEAAVFTIHGFCK
RVLSENAFEARMPFETELVTNEDSLLTELTDKFWYQHFLKPDALHLRLLQKRSLTPDSLL
ADVRNFIGKPYLRTDMPQVTNESFAQLQTAFAQALQTCQQTWVSERDAIVSLLLGGALNG
STYNKRHVPNWAGKLDTYFAQPLALPHEVLERFTPNVLTDKTKDGKATPEHTFFAQVEAL
IAADYAQQEGEQAALEHLRWQLLHHLRAELPLRKQQLGILTFDDLLLHLRDALEQHPDFA
PRLALKYQAALIDEFQDTDPIQYEIFERIYRDKPEQPVFYVGDPKQAIYGFRGADIYTYL
KAANSTQHHYTLQHNFRSHPDLLQGLNHLFDQSANPFRSDIAYEMVSAGKAQDSLRVEPP
LSPIRLWDWDSLEEDFNSTSVQAAMAEAVADDIARLLNAARMGAAKIGDRPVESSDIAVL
VRENQQGEQIKQALLARGIASVQKSRDSIFCTREAADFRAILRAIAEPGNETALKQALVT
ELCGFTAQDLLVLDDNPASLEAELEAFHRWHKTWHTQGFMPMFRQWMLQRQRYTHLLALA
DGERRLTNLLHLAELIHTESRLQGHGMHALVRWLQQKAEAGEKDEAHELRLESDEDLVQI
TTIHKSKGLEYGIVYCPYLWVERDAKASTWFSWYDAGSAGGVSRLQADALAGDAARRCFR
EAEQAESLRLLYVALTRAKYHCTVTLVSGRLNHFDYYSALGWLLFGTLPQSKEILGKLRK
EGMQPDERQRLMHTQLAHLVEQSAGRISHETLPVNETPLRYQPDNRQWQPSIRRYQQRYA
PIPKVGSFSGLAAGKEDERPDYDTLVFASTALSDRGRGDVFPRGAKAGSCLHKMLEELDF
TQPLSAQHDTVLRPALKRHGLPERWLAAGAQLLENTLHTPLSFTQQRLCDLPKSQRLDEL
EFYFPVERLRLKPLQALLHQHLPLEWEVIHHAIDKLKFNELTGYMKGFIDLVFVAEGQYF
VVDYKSNELGGTLADYTPLAMQEAMAEHHYYLQYLIYCLALHRYLQQRLRGYEWEQHVGG
ALYLFLRGMTPEQAGSGVFFHKPALELIDALDQLMGY
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacactgaatgcccaaacagtatccttagtgggaaccaacctgatcgaagccagc
gccggaaccggtaaaacctggacaatttcctggctctacctgcgcctcattgctgtctat
ggcctaaccgtcgacaaggttttggtagtgacttataccgaagcggcaaccgctgagtta
cgtgaccgtatccgtaagcgtttggcagatgccttggcctttctggaagagcgcccacat
gaggaaacgtatgaagtattgctgacagaaactccgttgcatgactgcattcagcgcttg
caattggcattggtaagtttcgacgaagcggcggtatttaccattcatggtttttgtaag
cgggtattatccgaaaatgcttttgaagcacgaatgccgtttgaaaccgaattggtgact
aatgaagacagcttattgactgaactcactgacaagttttggtatcaacatttcctgaaa
cccgatgcgctgcatttgcggttattgcaaaaacgcagcctgaccccggacagtttgctt
gccgatgtgcgtaactttattggcaagccgtatttgcgcaccgatatgccgcaggtgacg
aatgagtcatttgcgcagttacagacggcatttgcccaagccttgcaaacctgtcagcag
acgtgggtaagtgaacgtgacgctattgtcagcttattgctaggcggggcgctcaatggc
agcacttacaataaacgccatgtgccgaactgggcgggcaagctggatacctattttgcg
caaccgttggcgttgccccatgaggtgcttgagcgtttcacgccaaacgtgctgacagac
aaaaccaaagacggtaaagccaccccagagcatacgttttttgcgcaagtagaggcatta
atcgcggcagattacgcccagcaggaaggtgaacaagccgcgttggaacacttgcgttgg
caattactgcaccacctgcgtgctgaattgccactgcggaaacagcaattagggattctt
acttttgatgatttactgctgcatttgcgcgatgccttggaacaacatcccgattttgca
ccgcgtttggcgctgaaataccaagcggcattaattgatgagtttcaagatactgacccg
attcagtacgagattttcgagcgcatctaccgcgataagccggaacaaccggtattttac
gtaggtgaccccaaacaagcgatttacggttttcggggggcggatatttatacctacctg
aaagccgccaacagcactcagcaccactacacgctgcaacataattttcgttcgcacccc
gatttgttgcaagggttgaaccacctatttgatcaatctgccaatccattccgcagtgat
attgcttatgaaatggttagtgcaggtaaagctcaagacagtttgcgggtagagccgcca
ttgtcgcctatccgtttgtgggattgggattcgctggaggaggattttaatagcaccagc
gtacaggctgcaatggctgaagcggttgctgatgacattgcccgtttgttgaatgctgcc
cgtatgggggcagctaagattggcgaccgcccggtggaaagcagcgatattgcggtattg
gtgcgagaaaaccagcagggtgagcagattaagcaggcgttgttggcacgtggcattgcc
agtgtacaaaaatcacgtgacagtattttttgcacccgtgaagcggctgatttccgggcg
atattacgtgccattgccgagccgggtaatgaaacggcgcttaaacaagcactggtgact
gaactgtgtggttttactgcacaagacttgttggtgttggacgataatcctgcgtcactg
gaagccgaactcgaagccttccaccgttggcataaaacatggcacactcaaggctttatg
ccgatgtttcgacagtggatgttgcaacgccagcgctatacacacttattagcgttagcg
gatggtgaacgccgccttaccaatttattgcatttagcagaactcatccataccgagagt
cgtttgcaaggtcatggaatgcacgccttggttcgctggttgcagcaaaaagcggaggca
ggtgagaaagacgaagcccatgagttgcgcttagaaagtgatgaggatttggtgcaaatt
accaccatccacaaaagtaaagggctagagtacggtattgtgtattgcccttatttgtgg
gtggaacgtgatgccaaagccagcacttggttcagttggtatgatgcgggttcagccgga
ggcgtttcgcgtctgcaagccgatgctctagcgggtgatgctgcgcggcgctgtttccgg
gaggctgaacaggctgaaagcctgcgcttattgtatgtggcgctgacccgtgccaaatac
cattgcaccgtcactttggtgagcggacgccttaaccatttcgactactattcagcattg
ggttggctgctgttcggcacattgccgcagagtaaggaaattctcggtaaattgcgtaaa
gaaggaatgcaacctgatgaacgtcagcgtttgatgcatacccaattagcgcatctcgtg
gagcagtccgcaggccgtatcagccatgagacattgccggtgaatgaaacgccgctacgt
tatcagccagacaatcggcaatggcaacccagtatccgccgttaccagcaacgttatgca
ccgatacccaaagtcggtagtttcagcggtttagcggcaggcaaagaagatgagcgcccg
gactatgacacgctggtattcgcttcgactgcgctcagcgaccggggtcgtggcgatgta
tttccacgtggtgcaaaagctggaagctgtttgcataaaatgctggaagaactggatttt
acccaaccgctttcagcacagcatgacactgtattgcgtcctgcactaaaacggcatggt
ttgccagaacgctggttggcagcaggtgcacagctactcgaaaacaccttacataccccc
ttgtcgtttacccagcagcgtctttgcgacctgccgaaatctcaacgccttgatgaactc
gaattctattttccggtagaacggttacgtctgaaaccattacaagctttgctgcaccaa
caccttccccttgaatgggaggtcattcaccatgctatcgacaagctaaaatttaatgag
cttacgggttatatgaagggctttattgatctggtgtttgtggcggaggggcaatatttt
gtggtggattacaagtcaaatgaactgggtggaactttggctgattacaccccgttagcc
atgcaagaagcgatggcggaacaccattattacctgcaatacctgatctattgtttagcg
ttgcatcgctatttgcaacaacgtttgcgggggtacgaatgggaacagcatgttgggggg
gcgctgtatttatttttgcgcggcatgacaccagaacaggcaggatcaggtgtatttttc
cacaaaccggcattagagttgattgatgcgttggatcaattaatgggctattaa
DBGET
integrated database retrieval system
