Candidatus Thiothrix putei: QJT81_18510
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Entry
QJT81_18510 CDS
T10292
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tput Candidatus Thiothrix putei
Pathway
tput03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tput00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QJT81_18510 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tput03021
]
QJT81_18510 (rpoA)
03400 DNA repair and recombination proteins [BR:
tput03400
]
QJT81_18510 (rpoA)
Enzymes [BR:
tput01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QJT81_18510 (rpoA)
Transcription machinery [BR:
tput03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QJT81_18510 (rpoA)
DNA repair and recombination proteins [BR:
tput03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QJT81_18510 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
WGZ93757
UniProt:
A0AA95HA89
LinkDB
All DBs
Position
complement(3607846..3608850)
Genome browser
AA seq
334 aa
AA seq
DB search
MTSKTTELLKPRNVHVQETGLNTYRITLEPLERGFGHTLGNALRRILLSSIPGSAVTEVQ
ITGVVHEYTSIEGVQEDVVEILLNLKNLAIRLNARDEATLTLKKKGKGVVTAADIERDHD
VDIINPDHVIAHITKDDADLEMSLTITRGRGYQPASVRRGPDSPELPLGTLVLDASYSPI
TRVAYNVDSARVEQRTDMDKLVLEIQTNGSVNAEESIGMAAQILQQQLAVFFDLRIEEPV
RREESQPEIDPILLRPVDDLELTVRSANCLKAENLFYIGDLVQRTETELLKTPNLGKKSL
TEIKDVLAQHGLTLGAKLDSRPPAGLDHRDSKVA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgaaaacaacagaactgctgaaaccacgcaatgttcatgtgcaggagacgggt
ttaaatacctatcgcatcacacttgagccattagagcgtggtttcggtcacacgttgggt
aacgccttgcgccgcattttattgtcctctattccgggcagtgcagtgacggaagtgcag
atcactggcgtggtacacgaatacaccagtattgaaggtgtgcaagaagatgtggttgag
attctgttgaatctcaaaaacttggcgattcgccttaatgcccgtgatgaagcaaccttg
accttaaagaaaaaaggcaaaggtgttgtaacggctgcggatattgagcgcgatcatgat
gtggacatcattaaccctgatcatgtcattgcacacattaccaaggatgacgctgatctg
gaaatgagcctgaccattacccgtggtcgtggttatcagccagcatcggtacgccgtggc
ccagattcacccgaactgcctttaggtactttggtgttggatgccagctacagcccaatt
acacgtgttgcctacaatgtggatagcgctcgtgttgagcagcgtactgacatggacaag
ctggtgctggaaatccagaccaatggttccgttaacgcggaagaatccattgggatggca
gcacagattctgcaacagcaattggcagtattcttcgatttacgtattgaagagccggtt
cgccgtgaagaatctcaaccagaaattgacccgattctgttgcgtccggttgacgatctg
gaactgactgtacgttcagctaactgcctgaaagcagagaacctgttctacatcggtgat
ctcgtacaacgtactgagactgaattgctgaagactccgaatctgggcaaaaagtctttg
actgaaattaaagatgtgctggcacagcatggtctgacactgggcgctaagctggatagc
aggcctccggcaggtctcgatcaccgtgacagcaaagtggcttaa
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