Theileria parva: TP02_0506
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Entry
TP02_0506 CDS
T00254
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tpv
Theileria parva
Pathway
tpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TP02_0506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpv03019
]
TP02_0506
Messenger RNA biogenesis [BR:
tpv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TP02_0506
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TP02_0506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNOT1_CAF1_bind
DUF3819
Motif
Other DBs
NCBI-GeneID:
3501867
NCBI-ProteinID:
XP_765072
LinkDB
All DBs
Position
2:complement(1004976..1012806)
Genome browser
AA seq
2281 aa
AA seq
DB search
MMSPSSPYTYNFNSNFEQNEVYSYISGLKLDNRNLKEFLNKEYFGKICEQIVYYCGDFVN
SVKFLENLVKICKFIHSKDVSGSKSYRSLTVSILTQRFTNPLFQADLILTFLENMYNELV
SQDFKDFWHFSLNFSTTFGFNLKNPFNASFNDKTSPEGDSQSDHESDEYKHEDDLGYDYS
EDNILKSDLFFNLFPAAQDEDLIEVYWILETDLLFALFHSMRSSDHSDRFYPLFLSLLKE
AKNPSIFSRALIFKLALVWSDYMNFGRNNYNPISLKIVTMNQDFWFVFQQTLCTLVPKSV
LLAEVKQFKDDFKDKRCESLFDFILNIAIHTDSDCFFIVLLELLRACEYDADLIKYSVQM
FQSTLLEFFKHNRVRFSRGLLEIVCFCRQHFDWGFMTMLVHSIDTLINGDSDKFAKISLS
DAMIDYLAWKLQLETDLNRNLLDSDSSILSQLSDTEDHRELSNVHGGELSNRDGEHSNEE
VSVVRFQLSTNIIAEMFYILHHLTGPNEVLLQLFFMYNQHLKSLSSYNILLLPLYRGMDD
RIKRGLQLEDHEDQTLEDHALDDEDKEPDLSVPGLNKLDFMDKTQFALGPNKDIYGYLLL
NEDSELTTSHVVTLIFSGKMAKNVLNAVKLLNSEDGPRPQHILNLILRKFVNKLQQLFVL
NVPENFCLHMAKPSAEEELLIKNLKLLSSFLSGLISLHINSDHIDSIYMIFMTLLECLRA
DTIFLIEFSFLTFNNTKNLFSYPHFTREFLSDPKVAKFYPNLLKTYKNILSSDSVSEVET
NMDDNIANDVVDQMGLDGVDAVEVSVEDSDKCIRDKGGVVIIKEPDVPSAPVSVGGTVTL
GATPSHMPVSSIPTPTGPVPSVGYEVLTGICANTDYNPPKIHPLFYHEQCLMTILNVGID
DFFNTLKLQIDVPENTTDSVNAFTFSGPQFVATVESLINMGNLDWLFFLVLRHAVIKGES
SFPEITTLLQTLGPKMCDYFVRFLSFSVNLFLKYLRSCRALLVYKKILLVCASLLGHFTI
ARNKPLLTKHLNLKQLLSFSYEKGMLSIAVPFVCRLMTYVVKSKIFKLPNPWTFCVLSLL
NEIKNVKNLKQILVLEISNLIMLLMAPKNQQQSSPIHTSQSSSNLFSLPGGQTKSASMYN
LPTGASPSVVHSPADLNSVMKANILGGNASTGSHIKDLLKHRVLGEFDQSCRFSSNIWSN
SNETKLNIPPIHNDIKVLLKRKIIINSKLITTTNLSINNTASLNSNNGVAVNNTNGGFNS
TNAVAVNGNSVLGTKENLQMSQKDSGVINMVMSMDLYKLILNAIESCYRESIFIIEKIVP
ICVSTCGVLSKIDFSTDTSIDTLKRCLTSMTTGLSTSLVNVLCKEVLLSILSYEIYQSLL
NHYTQVTSGNAGNVNMGESCPIFDCIWLEYISQILARDNLALVCALVEQLTLELMGRSLE
EMISSWANSSTTSSSSISSILYNQFLSTLHTSNTSSGGYYLNSANLRNLDDLSLLYKKYL
TLVPSTIARVERTEKRPGLRFPDFFIVPPIESIPTNLVICKFEEFEQRLKESAKYLLMYP
PIVPMANCKFLYKCESSSLLLLSFLPKNHQIFTLLWSIHYIVVKATNVTECYEMILNRVV
KNLVDSKAVSIPSLVNEVELTLLEMLCLDNANLLNITTALLPNLTFNKLVLFLRFKLIKI
PALDIYLCNSGDLEFVTKMVYRLIVDSNYITLKELPLSLKFLSKFDKNTLIHSVGEPTKL
NIILSKLFNQPIPNTGSISNMSNTSTMGTNNTGPQTDRLISLRLLFMNRVYIRNRCVVQT
EVSKKHINMFMEFLNCESDSDVDLFFINFNENPIDHFITSALLLTLYISYQSQHYDSVER
VERVEKMDHKRLMKFDGIPRVTYGSPNLEYVPVFCKLVNGFIQSDVFILQKVLHILLSVL
YKNYCFPVFFKVIQNFIFNTNYTFSAHVSISHFLLYCNPTEMASFAPFWVQLATSKQLIQ
SLIQSPVEWYTLSQLIKYTLIYYTSATSQRTAQKDGKETGIDTLLDNILNILLYLLQICP
EFICGYYLSFCEVTTSVRFRNIFTFSTPKNVKCSNPATATEISETSPLSFVNHIQYIIQK
PTLKGLTDTFIAEPSDRLVPMILKELQAEGILIYYTLYLGYTLPLLISKIGLTNANTTPG
SDGNPNSVISMRVINCYLLLEKLIVQSKSKLLVGSMLLHARYPNLVTIRFISIFKNLFER
AENVQELIITCILERLLVKPHPWGVVHLLFQLLKFKNFWNYIQQNKHFEEQLKKIKTLYM
S
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgccctcatctccctacacatataattttaatagtaattttgaacaaaacgaa
gtttactcgtacatttcaggattgaaactggataaccgtaatttgaaggaatttttaaat
aaagagtactttggcaaaatctgcgagcaaattgtatactattgcggagactttgttaat
agtgttaagtttttggaaaatcttgttaaaatatgcaagtttatacactcgaaggacgtg
agcggaagtaaaagttacagaagtttaactgtatcgatactgacgcaacgatttacaaac
ccacttttccaggctgatttaattttaacatttttagaaaacatgtataacgagttggtt
tcccaggacttcaaagacttttggcacttttcactgaatttctcgacgaccttcggcttt
aatctgaagaacccgttcaacgcgagttttaatgataaaacttcacccgaaggcgattcg
caatcggatcacgagagcgatgaatacaaacatgaagatgatctaggctacgactacagt
gaagataacattctcaaatctgatctatttttcaatttatttccagcagcacaggacgag
gacctcattgaggtttactggatcctggaaacggacctcctgtttgcactatttcactcg
atgcgtagctcagatcattctgacaggttctatcccctattcctgagcctgttaaaagag
gcaaaaaacccatcaatattctcaagagccctaatctttaaactggccctcgtgtggtca
gactacatgaatttcggaagaaataactataacccaatttcactaaagattgtgacaatg
aaccaggacttttggttcgtatttcaacaaaccctttgcacactagttcccaaatcagta
cttttggctgaagtcaaacagtttaaggacgattttaaggacaaaagatgtgagtcactg
tttgacttcatactcaatatcgcaatacacacagattcagactgtttcttcatagtttta
ttggagttgttgagagcctgcgaatacgacgccgacttaataaagtactcagttcagatg
ttccagtcaactttacttgagttttttaaacataacagggtcaggttcagtcgagggctt
ctggaaatcgtctgcttttgcagacaacactttgactggggctttatgactatgctggtg
cactcaattgacacactaatcaacggagattctgacaaatttgccaaaatctcactctca
gacgcaatgattgattacctggcatggaaattgcaactagaaactgatctaaacagaaac
ttactggattcagattctagcatactatcgcaactgtcagatacggaagatcaccgtgaa
ctcagtaatgttcatggtggggaactaagtaacagagacggcgagcacagtaatgaagag
gttagtgtggtaagatttcagttatcaacaaatataatagcggagatgttttatatattg
caccatttgacgggcccaaacgaggttttactccagttgtttttcatgtataaccagcac
ctgaagtctttgagcagttacaatatattgttgctaccactttacagaggaatggacgat
cgaattaagcgaggattgcagttggaagatcatgaagatcaaactctggaggatcacgcc
cttgatgatgaagacaaagaacctgatctatcagttccaggcctgaataaacttgacttc
atggataagactcagtttgcacttggaccaaacaaggatatttacggatatttactcctt
aacgaggacagtgagctgacaacatcacatgtggttacactcattttctcaggaaaaatg
gcgaaaaacgttctaaacgcggtgaagttgctgaattctgaggatggacccaggccccaa
catattctaaacttaattttgagaaagtttgtgaacaagctccagcaactgtttgtatta
aatgtgcctgagaacttttgtctacacatggcaaaaccgtctgcggaagaagaacttttg
attaagaacctgaagctgctgtcgagtttcttgtcaggcctgatcagcctgcacattaac
agtgaccacattgactcgatttacatgattttcatgactctgctggagtgcctgagggca
gacacgattttcctaattgagttctcatttctgacctttaacaacaccaagaatctgttc
agttacccgcactttacgagggagttcctatcagacccgaaggttgccaagttctaccca
aaccttctgaagacctacaagaatattttatcatcagattcagtatcagaagttgaaact
aacatggatgataacatagccaacgatgtcgttgaccagatgggactagacggcgtggat
gctgtggaggttagtgttgaagactcggataagtgcataagagataaaggaggagtagtg
ataataaaggagccagatgtaccatcagcacctgtgtcagttggtggaaccgtgacatta
ggagcgactccatcgcacatgccagtttcttcgatcccaacaccaacaggaccagtaccg
tcagtggggtatgaagttttgacaggcatctgtgctaacacggactataacccaccaaag
atccacccactattctaccacgaacagtgtttgatgacgattttgaatgttggaattgat
gacttcttcaatactctgaagttgcagattgacgtaccagagaacacaactgactcggtt
aacgctttcacattctcaggtccacagtttgtagcaacagtagaatctctgattaacatg
ggaaaccttgactggctattctttttggtactgagacacgctgtgattaaaggtgagagt
agttttccagagatcacgaccctgctgcagactctggggccgaagatgtgtgactacttt
gtacggttcctatcgttctcagttaacctgttcctaaagtatttgagatcatgtcgagca
ctgttggtgtataagaagatcttactggtttgcgcatccctcttaggccacttcacaata
gccagaaacaagccgctgctgacaaagcacttgaacttgaagcaactgttgtcattttcg
tacgaaaaggggatgctctcaattgcagtaccgtttgtgtgcaggttaatgacgtatgtg
gtgaagagtaagattttcaagcttccaaacccatggacgttttgcgttctctcactgctt
aacgagattaagaatgtcaagaatttgaagcagattctggtgttggaaataagtaacttg
attatgctacttatggcgcccaaaaatcagcaacaatcaagtccaatccacacatcacag
tcgagttctaacctgttttcactgcctggtggacaaactaaatcagcaagcatgtataac
ttaccaacaggtgcaagtccgtcagtggttcactcacctgcagatttgaacagcgtgatg
aaggctaacatactcggaggaaacgcaagcacagggtcacacataaaggaccttttgaag
cacagagtgctgggtgagtttgatcagagttgcagattcagttccaacatctggtcaaac
tcaaatgagacaaaactcaacatacccccaatacacaatgatatcaaggtgttgttgaag
aggaaaatcatcattaactcgaaactgataacgactacaaatctatcaataaataataca
gcatcgcttaatagcaacaacggagttgcagtcaacaacacgaatggtggatttaacagt
acgaatgcggttgcagttaacggaaactcagttttaggaacaaaggagaatttacaaatg
agtcagaaagattctggtgtaataaacatggtaatgagtatggatttgtataaactaata
ttaaacgcgatagaaagttgttatcgagaaagcatatttataattgagaagatagtgcca
atttgtgtgtcaacatgtggagttttgtccaagattgatttctcaacggatacatcaata
gacacattgaaaaggtgtttgacctcaatgacaactggactgagcacaagcctagtgaac
gtactctgtaaggaagttttactctcaattctgtcctatgaaatttatcagtcacttctg
aaccattacacccaggttacaagtggcaatgccggcaatgtaaatatgggtgaaagttgt
ccaatatttgactgtatatggttggagtatatatcacagatactggcaagagataatttg
gcattggtatgtgcattggtggagcagctaactttggagttgatgggaagatcattggaa
gagatgatttcaagttgggcaaatagctcaacaacgagttcaagtagtatttcaagcatt
ctgtacaaccagtttctgagcacattgcatacaagcaacacaagttcaggagggtattac
ttaaactcagcaaatttgaggaacctggatgatttatcacttttgtacaagaaatacttg
acattggtgccatcgactatagcaagagttgaaagaacggaaaagagaccaggtttaaga
ttcccagatttcttcatagtaccgccaattgaaagcataccaacaaatttggtaatatgc
aagtttgaagaatttgaacaacggcttaaggagtcagcgaagtatttgcttatgtaccca
ccaattgtgccaatggcgaattgtaaatttttatacaaatgcgagtcatcatcattactg
ttgctgagtttcctgcctaaaaatcatcaaatattcacactactgtggagtatccactac
atagtcgtgaaggcgactaatgttacagaatgttacgagatgattttgaacagggtagtg
aagaatttggtggactcgaaagctgtttcaattccttcgttggttaacgaagttgagttg
acgttgcttgaaatgctctgcttggataacgcaaacttgctcaacatcacaactgcactg
ctgccgaacctcacctttaacaagttggtactgttcctgaggttcaaactgattaaaata
ccagcgctggacatttacctatgtaactcaggagacctcgaatttgtaactaaaatggta
taccgactgattgtggactcgaattatatcactctcaaggaattaccattatcgctcaag
ttcctaagcaaattcgataagaacacactcatacactcggttggggaaccaactaaactt
aacatcatcctgtccaaactgttcaaccagccaataccaaacactggcagtatcagtaat
atgagtaataccagcacaatgggtaccaataatacagggccacagacggacaggttgata
agtttgagattactattcatgaacagagtgtacataaggaatagatgtgtagtacaaacg
gaagtgagtaagaagcatattaatatgtttatggagttcttgaactgtgagtcggattct
gatgtggacttgttcttcataaacttcaacgagaacccaatagaccactttataacatca
gcacttcttttgacactatacatttcataccaatcacagcactatgactctgtggaaaga
gttgaaagagtggaaaaaatggatcataaaagactgatgaagttcgatggaattccaaga
gtaacatacggtagtcccaatttggagtatgtgccagtgttttgtaagttagtgaatggc
tttattcagagtgacgtcttcatacttcagaaggtgttgcacatactgttgtctgtgctg
tataagaattactgcttcccagtgttcttcaaggttattcagaattttatttttaataca
aattacaccttttcagcccatgtgtcaatttcgcactttctcctctactgtaacccgact
gagatggcgagttttgcacccttctgggtccaacttgcaacaagcaagcaattgatacag
tcattaattcagtcaccagttgagtggtacacattatcacaacttattaagtacacactg
atttattacacgtctgcaacctcacagagaacagctcagaaagacgggaaggaaactgga
attgacactctcttggacaacatacttaacattctgctgtatttgttacagatatgccca
gagttcatttgtggctactacctgtcgttctgtgaagtaacaacgtcagtgaggtttagg
aacattttcactttcagcactcctaagaatgtcaagtgttcaaaccctgcaactgccact
gagatttcagaaacatcaccgctctcattcgtcaaccacatccagtacataattcagaaa
cctacgctaaaggggttaacagatacatttatagctgaaccttccgatagactagtgccc
atgatattgaaggagttgcaggccgaagggatactcatatactacacgctgtatttggga
tacacattaccacttctgattagtaaaattggccttaccaatgctaatacaacgcctgga
tcagatgggaaccctaacagtgttatatcaatgcgggtgatcaattgttatttattgttg
gagaaattgatagtccaatcaaagtccaagttactggtgggttcaatgcttctccatgcc
aggtacccaaacctcgtcaccatcaggttcatttcaatcttcaagaacctgttcgagagg
gcagaaaacgttcaagaactaattatcacctgtattctagaacgtttactggtgaaaccg
catccttggggcgttgtccatctcctcttccaactcctcaagttcaaaaacttctggaac
tacattcaacagaataaacactttgaagaacaactcaaaaagattaaaacactctatatg
tcctga
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integrated database retrieval system
