Theileria parva: TP02_0676
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Entry
TP02_0676 CDS
T00254
Name
(RefSeq) hypothetical protein
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
tpv
Theileria parva
Pathway
tpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TP02_0676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpv03019
]
TP02_0676
Enzymes [BR:
tpv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
TP02_0676
Messenger RNA biogenesis [BR:
tpv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
TP02_0676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
DUF5320
EAD9
Motif
Other DBs
NCBI-GeneID:
3502103
NCBI-ProteinID:
XP_765242
UniProt:
Q4N4G4
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All DBs
Position
2:1355584..1357596
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AA seq
624 aa
AA seq
DB search
MLTKPLFSTGFYSILHKPNRNVYKKLFSTLIFTNKLSQNKASEHHSGSLHIHLNYQNGRN
SSDFNYNLIKCGDSTLNYKNHFSTRSNVTTKPLWDLHSVIITELIERSDFVALDVEYTGL
HVKDERFIGVDKCYESHSLGAKKFIPCQIGLTMAKYENNIWNLTTTSLFTIPSEGKSFSV
NMSTLNFLKDNNFDFNSWIRNGITHLTPKEEEERKSLIVSKLHQIRLNLQNLSNSNIENN
GRNTNNMNTEYDVSSIKDLEDRRVVEQMIERINKWIVDEGDEGRKPLEFEVESAFLRLLM
HSVISIKYPNLYSNSSQRNGVRCVVVYKTQMELLEEERKVLEEELEAINKQIGLRTLFDT
VSKNNKILVGHNCFYDILHIYQTFYGDLPENVEDFKKKWVQVFPTIFDTKYISEYYHQFT
PHTTLKSLYNSFLPNQNGFNRVKISSLGKSGMVSGYGDVINEGEKEHEAGYDSLMTAIVF
IRQLETVIKSKNSSLNNLINAYLDTSNTPNGMGKVIRNIFGEIMNSVRLVKCQPSVINMN
NEEDMSKHFYMFGFPNVWKKWEIMKIWSPLWVSISWIDETSCWIIAKNSEDVKNINLIYK
MMKNPQFKLYNYGQYLEKMNQSTV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaaccccttttctccactggattctacagtattttacacaaacctaataga
aatgtatataaaaaattgttttctactttgatttttaccaataagttatcccaaaataaa
gcttcagaacaccattctggctctctacacattcatttaaattatcaaaatggacgtaat
tcatctgattttaattataatttaataaagtgtggagattctactttaaattataaaaac
catttttcgactcgatcaaatgtaactaccaaaccactatgggacctacacagcgtaata
attacagagttaattgagagatcagattttgtggctttggacgtagaatatactggactg
catgttaaggatgagcgttttataggtgttgataagtgctatgagtcccactctttggga
gctaaaaagttcattccctgtcaaatcggactaacaatggctaaatatgagaataatatc
tggaatctaacaacgacgtcattgtttacaatcccatcagaagggaagagtttttcagtt
aacatgtcaacacttaacttcttaaaggataacaatttcgactttaacagttggataagg
aatggaataacccatctgacacccaaggaagaggaggaaaggaaatcgttaatagtatca
aaactccatcagatacggttaaacttacagaatttgtctaattctaatattgaaaataat
ggcaggaacactaacaatatgaatacagaatatgatgttagtagtataaaggacttagag
gatagaagagtggtggagcaaatgatagaaagaataaataaatggatagtagatgaaggt
gatgaggggagaaaaccgctagaatttgaggttgaaagcgcctttttaaggcttttaatg
cactctgtaatctcaattaagtacccgaatttgtatagcaattcctctcagaggaatggc
gttagatgtgttgtagtttataaaactcagatggaactattagaagaggagcgaaaagtg
ttagaagaggaactagaggctataaataagcaaatcggactcagaacactttttgacacg
gtttccaaaaataataaaatccttgtaggccataactgtttttacgacattttacacatt
tatcaaactttctacggagatttgccagaaaacgtagaggacttcaagaagaagtgggtt
caagtttttccaacaatttttgataccaagtatatttcagaatattaccaccagttcaca
cctcacacaaccttaaaatccctatataattcatttctaccaaatcaaaacggttttaac
agagttaagataagttcactgggcaagagcgggatggttagtggatatggagatgtgata
aatgagggagaaaaggaacatgaagccggatatgacagtttaatgacggcaatagtattt
atacgtcaactcgagacggtaattaagagtaaaaatagttcattaaacaacttaattaat
gcttacctggacacatctaacactccaaacggaatgggaaaggtaataaggaacatattt
ggagaaataatgaattcagttcggctggtgaagtgccagccttcagtaataaatatgaac
aatgaagaggatatgtcaaagcacttttatatgtttgggtttccaaacgtgtggaaaaag
tgggaaattatgaaaatatggtcgccactctgggtttcaatttcatggatagatgaaacc
tcctgctggataatagctaaaaactcggaggatgtcaagaacattaatttgatctacaaa
atgatgaagaatccacagttcaaactgtataattatggacaatatttggaaaaaatgaat
caatccacggtttaa
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