Theileria parva: TP03_0185
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Entry
TP03_0185 CDS
T00254
Name
(RefSeq) DNA-directed RNA polymerase II largest subunit
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tpv
Theileria parva
Pathway
tpv03020
RNA polymerase
tpv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TP03_0185
09124 Replication and repair
03420 Nucleotide excision repair
TP03_0185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpv03021
]
TP03_0185
03400 DNA repair and recombination proteins [BR:
tpv03400
]
TP03_0185
Enzymes [BR:
tpv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TP03_0185
Transcription machinery [BR:
tpv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
TP03_0185
DNA repair and recombination proteins [BR:
tpv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TP03_0185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-GeneID:
3500122
NCBI-ProteinID:
XP_763203
UniProt:
Q4N0F9
LinkDB
All DBs
Position
3
Genome browser
AA seq
1681 aa
AA seq
DB search
MTTVIDLNRPFSPCELKRIRAIEFGLLDPELVKRMSVCEITLTELYREGIPQTGGLNDLR
MGTTDPRHICLTCSMDLKYCPGHFGHIVLAKPMYHYGFMMTVLKILRCVCFNCSKLLLNK
NDPRVQLILKSPSSSFRLNHLSELCSASRTCRIDTQTNTKIEGCGYPQPSYTKEGPNLMI
QFSQKQREILEESDEQCNDIKRPLTPEEAFKVLRGITLEDMKCLGFVPERSQPCWLILQV
LPVPPPAVRPYVQYGSDRSEDDLTLKLLDVLKTNNLIKRHDKRATAPHIIQEMCQLLQFH
ITTLFDNDIPGMPIASTRSKKPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVITGDPNI
PIDTIGVPKSIAMTLTFCETVNSLNYESLRKKVETGPHDWPGAKYIIRDDGTRFDLRHVK
KSSELQLEYGYKVERHMQDGDYILFNRQPSLHKMSIMGHRAKILPYSTFRLNLSVTTPYN
ADFDGDEMNLHLVQTHETRAEVKHLMLVPKQIVSPQGNRPVMGIVQDSLLAVSKFTKRDT
FLTRDELMSLLIWIPYWDGKLPQPAIFFPKNLWTGKQVISVLLTFNQSQGITNINLIRDG
TIKLDKDNLNCSINDSRVIIRKNEHISGIICKKTVGCSSGSLIHILWHEAGPEKCRDFLT
TLQKVVNNWFLQIGFTVSCSDICCSESTLNKVSRILDKSKKEVQKLVLQAQKGKLKCQPG
KSLFESFEARVNKELNDAREQSGSIVASSLNLSNNILSMVNSGSKGSTINISQIIACVGQ
QNVEGKRIPFGFRDRSLPHFIKHDYGPESRGFVSNSYLSGLTPQEMFFHAMGGREGIIDT
ACKTSETGYVQRRLIKAMEDVMVQYDRTARNGNGEILQFLYGEDGMGAEYIEDQFIDLMR
LDDEEIHRRFSHDFRSESYGLGWISEEIRNAILSDFSQQVILVEEFQKLLDLKKMICEEI
FPSGDYSQHLPINIKRILEYATTQFPASSTSKLNPVEIAQRTNKLLESLIIINTSGPNDI
LSEEAQQNATILIKAHLRCHLNSRYLMEQVQISSLALDWVYGEVERCFFKAIANPGECVG
AIAAQSIGEPATQMTLNTFHFAGVSSKNVTLGLPRLKELINVVTNVRTPSLTIYLDPSIN
KDQERAKEMQTLLEYTNFEKIVLSYTVVYDPVVDRTIIEEDYEWVRDYYEFPDEEMGTLG
QFVLRIVLNSKIMTDKRLTMKEVGEIIYSEFSNGEIDAIYTDDNSELLVMRIRVKYGGEG
DNSGPSDTEADFLNKFMTDVLCGIKLRGVKGITKVYMREENCVRYNSAVGSFDRVSQWVL
DTDGCNLESVLPITCVDYTKTFSNDVSEIFHVFGIEAARRALLREIRAVISFDGAYVNYR
HLSLLCDIMTQKGYLMSITRHGINRADRGPLIKCSFEETLETLLTAAVFGEVDHLKGVTE
NVIVGQLSPYGTGAFDIMIDEVKLRDANQTNAINVADTLGLVSPDSSPLSPSTPATKQTM
SPMAFSPTYTSLMMSPVGGIGMGPSTPGLMVDTYALGGSFSPTSPTSPMSPTSPMSPTSP
MSPMSPTSAMSPVYSPAYSPTSPMSPTSPANALSPTSPVYSPAYSPTSPTSAMSPTSPVY
SPAYSPTSPNLGYAPTSPVYSPAYSPTSPNYGYSPTSPLSPTSPAYSPTDPFSPNPFQDI
D
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtgatcgatttgaatcgacccttttctccctgtgagctcaaacgcatcagg
gcaatagaatttgggctcttggacccagaactagtaaaacgaatgtcagtatgtgaaata
actcttactgagttataccgagagggaatcccccaaaccggaggacttaacgatctccga
atgggaacaactgaccctcgtcacatatgtttgacctgttctatggatttaaaatattgt
ccaggccattttggacatatagttttagcaaagcccatgtatcactacggatttatgatg
actgtgttaaaaattctccgttgcgtatgttttaactgcagcaaactgctactaaacaag
aatgacccaagagtccagcttatcctgaagtccccttcaagttctttcaggctaaatcac
ctttcagaactctgttcagcctctcgcacctgcagaattgacactcaaactaacacaaag
atcgagggttgcgggtacccacagcccagctacaccaaggaggggcctaacctgatgatc
cagttctcacagaagcaacgtgagattcttgaggagtcagatgagcagtgtaacgacatt
aaacgtcccttgacgcctgaggaagcctttaaggttttaagggggattacacttgaggac
atgaagtgccttggattcgttcctgaacgatcacaaccgtgctggctgattctccaggtg
cttccagtaccacctcctgcagttagaccgtacgtgcaatatggaagcgatcgcagtgag
gacgacctaacactcaaattgttggacgttttaaaaacaaacaacttgattaaaagacac
gataagagagccacagcgccacacatcatacaggagatgtgccaacttctccagttccac
attacaacactatttgataacgatatcccaggaatgccaatagcatcaacgaggtctaaa
aaaccaataaaatcaattcgagcacgtttaaagggcaaggagggaagattacgtgggaat
ctgatgggtaagagggttgacttctctgcacgtacagtgatcactggtgacccaaatatc
ccaattgatacgattggagtgccgaaaagcatcgcaatgacccttacattctgtgaaaca
gtaaactcactaaactacgaaagcttgaggaagaaggtcgaaactggccctcacgactgg
ccaggagcaaagtacataataagagacgacggaactagatttgaccttcgtcatgtgaag
aagagcagtgaactacagctagagtatggatacaaggtggaacgtcacatgcaggacgga
gattacatactgtttaaccgtcaaccctctctccataagatgagtattatgggtcacagg
gccaagattttgccgtattcaaccttcagacttaacttaagtgttacaactccttacaac
gcagactttgacggagatgagatgaacttacacctggttcagacacacgaaacgagggcc
gaagtcaagcatctgatgctagtcccaaagcagattgtgtctccgcaaggaaacagacca
gtgatgggtattgtacaggactcactgttggccgtctccaagttcacaaaacgagacaca
tttctgactagggatgagctaatgtcgctcctaatttggatcccatactgggacggaaag
ttgcctcagccggcgattttcttcccgaaaaatctctggacgggtaagcaggtgatttca
gtgctcctaacctttaaccagtcccaaggaataacgaacataaacttgataagggatgga
acaataaagctggacaaggataacctaaactgcagtattaatgactcaagagttataatc
agaaagaatgagcatataagtggaataatttgcaagaaaacagtgggatgcagctcaggt
tcccttattcatattttgtggcatgaagctggacctgagaagtgccgcgactttctgaca
acactccaaaaggtagttaacaactggttcctgcaaatagggtttacagtctcctgcagt
gatatttgctgctcagagtctactttgaacaaggtgtccaggatcttggacaagagtaag
aaggaggtacagaagttggtcttgcaggcacaaaaggggaagttgaagtgccagccagga
aagtctctgtttgaatcatttgaggcaagagtgaataaagaattaaacgatgcgcgtgag
cagtcaggaagtattgtggcatcatcactgaacctctcaaacaacatactgtcaatggta
aattcaggctcaaaaggaagcacgattaacatatctcaaattattgcatgtgtcggacag
cagaacgtggaaggaaagagaattccatttggctttagagaccgcagtctcccacacttc
ataaagcatgattatggaccagagagtagaggtttcgtctcaaattcatatcttagtggt
ttaactccccaggagatgttctttcacgcaatgggaggccgagagggtattatagataca
gcctgcaagactagtgagacgggttatgtgcagaggaggctaattaaggccatggaggat
gttatggtccagtatgaccgcactgcaaggaatggaaacggtgaaatcctgcagtttctc
tacggagaagacggaatgggagccgaatacattgaggaccagttcatagacttgatgaga
ctggacgacgaagagatccaccgcaggttcagccacgacttcaggagtgagtcatacggt
ctaggctggatcagtgaggagataaggaacgcgattctatctgacttttcacagcaagtg
attctggttgaggagtttcagaaacttctggacctaaagaagatgatttgcgaggagatt
ttcccgagtggagactactcccagcacttgccaatcaacattaagcgcatcttagagtat
gcaacaactcagttcccagcctcttcaaccagcaagctgaacccagtagagatagcacag
cgtactaataaactgttggaaagcctaatcataattaatacgagtggaccaaatgatata
ttgtcagaagaggcccaacaaaacgctacgatcttgatcaaagctcatttaaggtgtcat
ttgaatagcaggtacttgatggagcaggttcaaatcagtagtttagcccttgactgggta
tacggtgaagttgaacgttgttttttcaaggctattgcaaaccctggagaatgtgtaggc
gcaattgcagcccaatcaataggtgagccagcaactcaaatgacgctaaacacattccat
ttcgctggtgtatcgagtaagaatgtgactctgggtctcccacgtcttaaggagttgatt
aatgtggtaacaaacgtgagaacgccatcactcacgatttacttagacccgtcaatcaac
aaagatcaggaaagagcgaaggagatgcagacgcttttggagtacacaaacttcgagaag
atagtgctgagttacactgtggtctacgaccccgtagttgacaggacgataatagaggaa
gattacgagtgggttcgagactactatgagttcccagacgaggagatggggacgctgggc
caatttgtactgagaatcgtacttaacagcaagataatgacagataagaggttgacgatg
aaggaggttggtgagataatatactcagagttttctaatggggaaattgacgcgatatac
actgatgataacagtgagcttctggtgatgagaattagggttaagtacggcggggaaggt
gacaactcaggaccatctgacactgaggccgacttcttaaacaagttcatgaccgacgtt
ctctgcggaataaagcttagaggtgtaaagggaataacgaaggtgtacatgagagaggag
aattgtgtgcgttacaacagcgcagttggtagtttcgaccgcgtctcgcagtgggtactg
gatacggatggctgtaacctggaaagtgtcctcccaataacttgcgtagactacactaaa
acattcagcaatgatgttagtgagatcttccatgtctttggtatagaggccgcaagaaga
gctcttctacgtgaaatcagagcagtcatttcgtttgacggagcatacgtcaactaccgc
cacctctcactcctctgcgatatcatgacacagaaaggatacctgatgagtattacgagg
cacggaattaacagagcagataggggtcccttaataaagtgtagttttgaagagacgctt
gagacgcttttgactgccgcagttttcggtgaagtcgaccacctgaagggagttacagaa
aacgttattgtaggacagctttcgccctacggcacaggagcttttgacatcatgatagat
gaagtcaagctcagagacgctaaccaaaccaatgcaatcaacgtggcagatactctggga
ctcgtctcgccagactcatcaccactcagcccctcaacgccagccaccaagcaaacaatg
tcgccaatggccttcagcccaacatatacatcattaatgatgtcaccagtaggaggtatt
ggcatgggtccaagtactcctggacttatggttgatacttatgcacttggcggaagtttc
agtccaacaagtcctaccagccctatgagtcccactagtcccatgagtcccactagtccc
atgagtcccatgagtccaactagtgctatgtcaccagtatattcaccagcatattctcca
acaagcccaatgagtccaactagtccagccaatgcattaagtccaacatcgccagtatac
tcaccagcctactcgccaactagtccaactagcgccatgagtcccacatcaccggtatat
tccccggcttattcaccaacgagtccaaatctaggatatgctccaacttccccagtttac
tcgcctgcgtactcccctacaagcccaaactatgggtactctccaaccagtccactaagt
cctacatcacctgcttacagtcccacagacccgttctcgcctaaccctttccaagatatt
gattaa
DBGET
integrated database retrieval system
