Theileria parva: TP03_0560
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Entry
TP03_0560 CDS
T00254
Name
(RefSeq) cleavage and polyadenylation specificity factor protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
tpv
Theileria parva
Pathway
tpv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TP03_0560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpv03021
]
TP03_0560
03019 Messenger RNA biogenesis [BR:
tpv03019
]
TP03_0560
Transcription machinery [BR:
tpv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TP03_0560
Messenger RNA biogenesis [BR:
tpv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TP03_0560
U7-dependent histone pre-mRNA processing factors
TP03_0560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
CPSF73-100_C
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Beta_lactamase3
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
3499870
NCBI-ProteinID:
XP_763588
UniProt:
Q4MZG0
LinkDB
All DBs
Position
3
Genome browser
AA seq
708 aa
AA seq
DB search
MDDRVRITVLGAGCEVGRSCVYVERENSCLMFDCGLHPALSGVGALPVFEAVDISKVQVC
LVTHFHLDHCGAVPYLLSKTKFNGRILMTPATKSICHLLWTDYARMEQLLTVKTIFNDDD
ESMDELVCGSGLYSFEDVEHALDRIETIDFHQEITVNDMKISCYRAGHVLGACMFLIEIG
GVRILYTGDYSMEKDRHLPSAEIPLTNVHLLISESTYGIRVHEERSQREMRFLHVVMDII
MRNGKCLLPVFALGRSQEILLILDDYWENNKQLHNVPIFYISPLASKSLKVYETFVGQCG
EYIKQSVYNGFNPFNFKFVRYARSIKQIRNYLLRDGPCIIMTSPGMLQGGPSLEVFELLC
PDNRNGVVLTGYAVKGTLADELKKDPELINLGTKVIKPRCSVEQISFSAHADYNQTKGFI
KKLSVPNVILVHGERNEMKRMKDKLEEDIPQLTVFMPEVLQEVTLTFTPQCFIDTIGSLS
SDLQLLDSTTLGGVFSVLDGNKEIDEVVSAVLLKDKDERIIYSDDVKEFDNLSINALNQK
MFFTFPHKLEYLVKALKSVYNKVELISENEANVLDQVKLYKPNNQLLLTWESGPVSDFIA
DSIILMVIKLVTSNDSVMEEVKVNSSMNIEESFLKFTEIQLLQKFGTSLEKDDRILKYKL
KDDELKEVYLTINLGLREVMSEDEKIKRNIMDIINHCKQHTTSNHILI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagagttagaataactgtattaggagctggttgtgaagttggtagatcatgt
gtatatgttgaacgtgagaattcatgtttaatgtttgactgtggtttacacccggctctt
tcaggtgttggagctcttcctgtgtttgaagctgttgatatttcgaaggttcaagtgtgt
ttggtgactcactttcatcttgaccactgtggcgcagttccttacctcctcagcaagacc
aaattcaacggtagaattctcatgactccagcaaccaaatccatttgccacttactttgg
actgattacgcgagaatggaacaattattaaccgtaaaaactatttttaatgatgatgat
gagagtatggatgaattggtatgtggttctgggttatattcatttgaggatgttgagcat
gccttggaccggattgaaacgatagattttcatcaggagattaccgttaatgacatgaag
atatcgtgttacagagctggccatgtgcttggtgcttgtatgttcttgattgagattggt
ggtgttcgtattctgtacactggtgactattctatggaaaaggatagacacttgcccagt
gctgaaatccctctcactaatgtccacttgttaatatctgagagtacttatgggattcgt
gtccacgaggaacgaagtcagagagaaatgcggtttcttcatgttgttatggacataata
atgcgtaatgggaagtgtcttttaccagtttttgcacttggaagatcacaggaaatttta
ctaattcttgacgattactgggaaaataacaaacaattacataatgtgcccattttttat
atctcaccccttgcttcgaaatcgttaaaagtttatgaaacttttgtaggacagtgtggt
gaatatattaaacaaagtgtgtataatggatttaatcctttcaattttaagtttgtaaga
tacgcgagatcaattaaacaaattcgtaactatctattacgcgacggaccttgtataata
atgacatctcctggtatgttacagggagggccatcacttgaggtgtttgagcttttgtgt
cctgataaccgtaatggtgttgtgcttacaggttatgctgttaaaggaactctggctgat
gaacttaaaaaagatccagaacttattaatttaggaactaaagttattaagccaagatgt
agtgttgagcagatatcatttagtgctcacgctgactataatcaaaccaagggctttata
aagaaattatccgttccaaatgtcattttagttcatggtgaacgtaatgaaatgaaacgt
atgaaagataaattagaggaggatataccacaattaacggtatttatgcctgaagtatta
caagaagttacattgacatttactcctcaatgttttatcgataccattggatcactctca
tcagacttacaacttttagattccactactcttggtggtgtttttagtgttttagacggt
aataaagaaattgatgaggtagtttcagcggtgcttttgaaggataaagatgaacgtatt
atttatagtgacgatgttaaagagtttgataatctgtcaataaacgctttgaatcaaaaa
atgttttttacattccctcacaaattggaatacttggtaaaagctctcaaatcggtttat
aataaagttgagttaatatctgaaaatgaagccaatgttctagatcaagttaaactatat
aaaccaaataatcagttactactcacatgggagtctggaccagtatcagattttatagcg
gatagtataattttaatggtgatcaagttagtgacgagtaatgatagtgtaatggaagaa
gtaaaagtaaatagttctatgaacattgaggaatcttttttaaagtttacagaaatacaa
ttgttacaaaagtttggaacctccctggaaaaggatgataggattttaaagtataagttg
aaagatgatgaattaaaagaggtttatttaacaattaatctgggattaagagaggtaatg
tctgaagatgaaaagataaaaagaaacataatggatattattaaccattgtaaacaacac
actacgtccaatcatattttaatataa
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