Theileria parva: TP03_0565
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Entry
TP03_0565 CDS
T00254
Name
(RefSeq) replication factor C large subunit
KO
K10754
replication factor C subunit 1
Organism
tpv
Theileria parva
Pathway
tpv03030
DNA replication
tpv03410
Base excision repair
tpv03420
Nucleotide excision repair
tpv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TP03_0565
03410 Base excision repair
TP03_0565
03420 Nucleotide excision repair
TP03_0565
03430 Mismatch repair
TP03_0565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpv03032
]
TP03_0565
03400 DNA repair and recombination proteins [BR:
tpv03400
]
TP03_0565
DNA replication proteins [BR:
tpv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TP03_0565
DNA repair and recombination proteins [BR:
tpv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TP03_0565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
AAA_22
Rad17
BRCT
RCF1-5-like_lid
Gp44_lid
RuvB_N
AAA_14
AAA_19
AAA_30
AAA_assoc_2
AAA_5
AAA_16
Motif
Other DBs
NCBI-GeneID:
3500384
NCBI-ProteinID:
XP_763593
LinkDB
All DBs
Position
3
Genome browser
AA seq
1084 aa
AA seq
DB search
MDIRLFFAKVNSSNSNSTSTTTNTNDTSNTKAGEVKSGNSKSFKNKEVDESKQDENKNIE
FEEFEFLNIGRRSLKSRIIHSSDSDSNSDENSLTISNHKPLKLLEPDGSDQIELVPQEQK
NEKEESVRYDYENKDEKQDKRDVKSVSNLALKELKTEIVDQKTGSNLQSDIQFCCNDEKK
EVDLSTFVRVKTEEKVDVDMNTYLNTISMSKTPPKTRSNPDKSPSNTSIYTISSSNSNDL
PPINTTNNTNTGNNNVFSNQLVNTPINTSDIHVKENTGFLTPKRIIEDLKTISFYETKEK
MPMISLFSSESPPTVISVPSDSFNSASTPNSSVTIHNTTDTTTCTTTVKINTGNKKSITK
KNKDTFENEKSTSRIEGKKFVFTGEMGIDRLEATLRVKKLGGIVVSAVSGVTDYLVYGDR
LEDGRPYQSGLKYKKAIELNNKKKRNIQLLNEEQFLQLLQSNIDENVKTDNTLENIVIED
NTIKDDGNTENINSIEKECMVLFEKYRPKRFSELIGNPRSIQRLKDWLQHFPKDKGKDEF
KAALLSGPPGIGKTTCAKLVGQFFNYHVIELNASDQRSKNSIENIFPLVTGTLTLNTIYS
ASSITNNTSFKNKNNNSNVNGLNAKTLLILDEVDGMSSGDKGGIQAISELIDITKCPIIL
ICNDRFSQKMSTLSNKCLDLRFNPPPIDLYINRINKICKLENIKVTENLLLELYHKSSGD
LRYTLNYLQFYNSNTNITPCINKKDESHFQNLFDNCNKVFHLSKLSFTEKINKVNELFFT
DFSLMPLMLQENYFKYTSNVVLLSKLSLTYVYADIANKILTQTQVYSLLPDLSSLTAIIP
SIEINKCVSVLKERLSFPQWLGKFSTTNKNKRLLKEISTNLCNKTSLYGYNLIIDGFLNI
LYQTTMKKLMMGSLEDCVEYMKRMGITKDMLVDNIASLRLKNEENLYAKVPTSIKTKLTK
LFTTQMIKSSSSKRKIKLENSDVKTSVDDRSDDALSSPDLYLTKLKPTKKVKKTRNNMVV
KARRNLARNEGPPKSVVERSKTKDNKTTTTFYVILFFLLLVVVSGLVEMQRHVKFTKNLF
SRFR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgtctctttttcgccaaagttaactcttccaattctaattctactagtact
actacgaatactaatgatactagtaatactaaggcgggtgaagtcaaatctggaaattca
aaatcttttaagaataaagaagtggatgaatcaaaacaagatgagaataagaatattgag
tttgaggagtttgagtttttgaatattgggagaaggtcattgaagagtagaattatccat
tccagtgactcggattcaaattctgatgaaaactctctaaccatttctaaccataaacct
cttaaactcttggaacctgatggctcagaccaaattgagcttgtaccacaagaacaaaaa
aatgaaaaagaggagtcggtgagatatgattatgaaaataaagatgaaaaacaagataag
agagatgtaaaatcagtttctaatttggccttgaaagaattgaagaccgaaattgttgat
caaaaaactggttcgaatttacaatctgatattcaattttgttgtaacgatgagaagaag
gaagttgacctttcaacttttgttagggttaaaactgaagaaaaggtcgatgttgatatg
aacacttaccttaatactatttccatgtctaaaactcctcccaaaactcgttctaaccct
gataaatcaccatctaatacttctatttacaccatatcatctagcaactccaatgattta
ccacccattaacactaccaataataccaatactggtaataataatgtatttagtaatcag
ttagttaatacgcccatcaatacaagtgatatccatgtaaaggagaatactggattttta
acacctaaaaggattattgaggacttaaaaactatttctttctatgagactaaggaaaaa
atgccaatgatttcactcttttcatccgaatccccacccacagttatctcagttccttca
gactcttttaacagtgcttccactcctaattctagtgttaccatacataacactactgat
actactacttgtactacaactgttaaaattaacaccggaaataagaaatccattaccaaa
aagaacaaagatacttttgagaatgagaaaagtaccagtagaatcgagggtaagaaattt
gtgtttactggtgagatgggtattgatcgtttggaagccactttaagggtcaagaagcta
ggaggaattgttgtttcagcagttagtggtgttactgattatttggtttacggtgaccgt
ttggaggacggaaggccttatcaatctggcctaaagtacaaaaaagcaattgaacttaat
aataaaaagaaacgcaatattcaactcctaaacgaagaacaattcttacaactactccaa
tcaaatatcgatgagaatgttaaaactgataatacacttgagaatattgttatagaggat
aacactataaaagatgatggaaatacggagaacatcaatagtattgagaaagagtgcatg
gtgttgtttgagaagtatagaccgaagagattttctgaattaattggtaatccaagatca
atacagcgattaaaagactggctacaacactttcccaaagacaaggggaaagatgaattt
aaagctgctcttctgagtggtccccctggaattggtaagactacatgcgctaaattggtt
ggacaattcttcaattatcacgtcatcgagttaaatgcttctgaccaacgcagtaaaaac
tccattgaaaatattttcccacttgttaccggaacactaactcttaacactatttattct
gcttcctccatcacaaataacacttcatttaagaataagaataataattctaatgttaat
ggactaaatgcaaaaacattgttgatacttgatgaagttgatggcatgagtagtggagat
aagggtggtattcaagccatttctgagcttattgacattaccaaatgtccaattattctt
atttgtaatgatagattttctcaaaagatgtccacattgagtaacaagtgtttggatttg
cgtttcaacccaccacccatagatttgtacataaaccgaatcaacaagatttgtaagttg
gaaaatataaaagtgactgaaaacttactcttggagttgtatcacaagtcgagcggcgat
ctcagatataccctcaattaccttcaattctacaactcaaacacaaatataactccctgt
atcaataaaaaggatgaatcccatttccagaatctatttgataattgtaacaaggtattt
catttgagtaagttgagctttactgagaagattaataaagttaatgagctgttttttact
gattttagtctaatgcctcttatgttacaggaaaactactttaagtacacgagtaatgtg
gtactactatcgaagttatcactaacatatgtttacgctgatattgctaataaaatactc
acacaaacacaagtttactcattattgcctgatctatcatctttaactgctattatacca
tcaatcgagataaataagtgtgtaagtgttttgaaggaaagactatcatttccgcaatgg
ctcggaaagttttcaaccacaaacaaaaacaaacgacttttaaaagaaatcagtaccaat
ctatgcaataaaacttcactctacggatataaccttatcatcgacggttttctaaatatt
ctctatcaaactaccatgaaaaaattgatgatgggaagtttagaagattgtgtagagtat
atgaaaaggatgggaataacaaaggatatgttagtcgataatattgcaagtttgcgactt
aaaaacgaggaaaatttatacgcaaaagtcccgacgtcaattaaaacaaagctgaccaag
ttattcacaacacaaatgattaaatcttcaagctctaaaagaaagattaaacttgaaaat
agtgatgttaaaacttctgtggacgatagatctgacgacgcgttaagttcgccggatttg
tatttaacgaaattaaaacctactaaaaaggttaaaaaaacaagaaataatatggtggtt
aaagctaggcgaaatttggcaaggaatgaaggcccacccaagtcagtagtagaacgcagc
aaaaccaaagacaataaaacaacaacaacattctatgttattttattttttctattatta
gttgttgtatcaggattagtagaaatgcaaaggcacgtgaaatttacaaagaatctattt
tcaagattcagataa
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