Treponema pallidum subsp. pallidum Nichols: TPANIC_0071
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Entry
TPANIC_0071 CDS
T02709
Symbol
clpB
Name
(GenBank) S14 family endopeptidase ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
tpw
Treponema pallidum subsp. pallidum Nichols
Brite
KEGG Orthology (KO) [BR:
tpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tpw03110
]
TPANIC_0071 (clpB)
Chaperones and folding catalysts [BR:
tpw03110
]
Heat shock proteins
HSP100
TPANIC_0071 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
TniB
AAA_7
ATPase_2
NBD_SMAX1
AAA_18
AAA_24
NACHT
IstB_IS21
AAA_25
bpMoxR
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AGN75290
UniProt:
O83110
LinkDB
All DBs
Position
complement(75914..78550)
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AA seq
878 aa
AA seq
DB search
MNTDRYTVKASEALNDAISLAEAENHGQVEEEHLLHALLSQKDGIISPLIEKIGAKPDFL
YDELLQCLRRKPRVTGPAAQTRCAPTLSKACARAERLALKNQDEYVSCEHLLLAISETDS
NTARLLHSQGITSKTISAALKDIRGSKRVTSQDPESTFQCLEKYCRDLTTLAREEKIDPV
IGRDEEIRRVMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVSGDVPESLKGKRLLSL
DLGALVAGAKFRGEFEERLKAVIEAVQKSDGGVILFIDELHTLVGAGASEGSMDASNLLK
PALARGELRSIGATTLNEYRKYIEKDAALERRFQQVYCVQPTVEDTIAILRGLQEKYEVH
HGVRIKDEALVAATVLSDRYITNRFLPDKAIDLVDEAASRLKMEIESQPVELDQVERKIL
QLNIEKASLLKESDPASKERLEKLEKELAGFLERRAAMQVQWQNEKGRIEESRRYKEELE
RLRIEETMFSREGDLNKAAELRYGKIPELEKKIMLLTAEVEKKSGLEGQLLREEVCEEDI
AKIISMWTGIPVSKMMASEQQKYLQLESVLMQRVVGQDEAVRVISDAIRRNKAGLSDTRR
PLGSFLCVGPTGVGKTELARTLADFLFNDERALTRIDMSEYMEKHAISRLIGAPPGYVGY
DEGGQLTEAVRRRPYSVLLFDEVEKAHQDVFNIFLQILDDGRLTDGQGRVVDFRNTIIIM
TSNIGSEHILSARESRTHTSDLPVPETQSTEEQTLPEQIRGLLHTYFRPEFLNRIDEVLI
FKRLTRKHIRLITDIQLQMVVERLESRHIKLRVRDAAKAYLAERGYDDTFGARPLKRAIQ
TELENALAREILSGRFRGGSTIVVDMCKDALCFTEQTS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagacaggtacacagtcaaagcaagcgaagcgctcaatgacgccatatctctg
gcagaagcggagaaccacggtcaagttgaggaggaacatctactccacgccctactttcc
cagaaagacgggattatctctccgctcattgaaaaaattggggcaaaaccggacttcctg
tacgatgaattactccaatgcctgcgccgcaaaccacgtgttaccggtcctgccgcccaa
acgcgctgtgcaccaacgctgagcaaagcctgtgcacgtgcagaacgcctcgcgctcaag
aaccaagatgaatatgtctcctgcgaacatctcctgcttgccataagtgagacagatagc
aacactgcacgtctccttcacagtcagggcattaccagtaaaactatcagtgccgccctc
aaagatatacgcggcagcaagcgcgttacgagccaggatccagaatcaacattccagtgc
ttggagaaatactgccgagatcttactaccctcgcccgagaagaaaaaatagatccggtt
attggacgtgatgaagagatccggcgcgttatgcaggtactctcacgtcgtacaaaaaat
aacccagtgcttattggagaacccggcgtagggaaaaccgctattgtcgagggacttgca
cgccgtatcgtttcaggagacgtaccagaaagcctcaagggaaagcgtttgctttccctt
gacctcggcgcattggttgccggtgcaaagttccgcggggaatttgaagaacgactaaaa
gcggtaattgaagcggtacagaaaagcgacggtggcgttattttattcattgatgaacta
cacacgctcgtaggcgccggcgcaagtgagggatctatggatgcgtcgaaccttctgaaa
cctgcgcttgcgcgcggtgaattgcgttcaatcggcgcaaccacgctcaacgaatatcgc
aaatatatcgaaaaggacgcagcgctcgaacgccgctttcagcaagtgtactgcgtacag
cctacggtggaggacaccattgctatcctgcgcggtttgcaagaaaagtacgaagtgcat
cacggggtacgtatcaaagatgaagcgcttgttgcagcaaccgttttgtctgaccgttac
atcaccaaccgctttttaccagataaggcgattgatctggtggatgaagcagcaagccgc
ctgaaaatggaaattgaaagtcagcctgttgagctagaccaggtggagcgcaagatatta
cagctgaatatcgaaaaggcctctctccttaaagaaagtgatccggcttcaaaggaacgt
ttggaaaagttagaaaaagagctcgcaggcttcctagagcgccgtgctgcaatgcaggtc
caatggcaaaatgagaaagggaggatagaagagtcacgccgctacaaagaggagcttgag
cgtctccgcattgaggaaaccatgttttcacgtgaaggggacctgaacaaggctgcagaa
cttcggtatggcaaaattccagaacttgaaaaaaaaatcatgcttcttactgcagaagta
gagaaaaaatccggtctagaaggacagctcttgcgcgaggaagtgtgtgaagaggacatt
gcgaaaattatttctatgtggaccggaattccggtatccaaaatgatggcaagcgagcaa
cagaaatatctgcagcttgagtcagtactcatgcaacgtgtggtagggcaggacgaagca
gtgcgggtaatttccgacgcgattcgtcgtaataaggcaggactttctgatacgcgccgt
cctcttggcagtttcttatgtgtcggtcccacgggggtaggaaagacagaacttgcacgt
acgttagctgattttcttttcaacgatgagcgtgcactgacgcgtatcgatatgagtgaa
tacatggaaaaacacgcgatcagccgactcattggcgcgcccccggggtatgtgggctat
gacgaggggggacaattgacagaagcggtacgacgtagaccctacagcgtacttcttttt
gatgaagtagagaaagcgcaccaggatgtgtttaatatattcctgcaaatactcgacgat
gggcgcttgactgacggccaaggaagggtggtggatttccgcaacacgatcatcatcatg
accagcaatatcggatcagagcatattctttctgcacgcgagtcgcgcacacacacgtcg
gacttgcctgtacccgagacacaatctacagaagaacaaactctaccagagcagatacgg
ggattactgcacacatactttcgcccagaattcttaaaccggattgacgaagtgttaatt
tttaagcgtctcacacggaaacatattcgcctcatcacagacatccaactgcagatggta
gtggagcgtttggaaagtcgacatataaaacttcgtgtgcgtgacgcggcgaaagcctat
cttgcggagcgcggatacgacgacactttcggagcacgaccactgaagcgtgcaatccaa
acggaattggaaaatgccctagcgcgtgagattctcagtggccgattcagaggcggctca
actatcgtggtggatatgtgtaaagatgctctgtgtttcactgaacaaacatcctga
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