Treponema pallidum subsp. pallidum Nichols: TPANIC_0077
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Entry
TPANIC_0077 CDS
T02709
Symbol
capD
Name
(GenBank) capsular polysaccharide biosynthesis protein CapD
Organism
tpw
Treponema pallidum subsp. pallidum Nichols
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
KR
NAD_binding_10
CoA_binding_3
Ldh_1_N
adh_short
CoA_binding
Motif
Other DBs
NCBI-ProteinID:
AGN75296
UniProt:
O83116
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Position
84263..85879
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AA seq
538 aa
AA seq
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MCGASLGDCVGSCARVNALYVGRDGVGAENVWGCGRSAVRESAHRDGIYIVGAGFAGSVL
AREIQTKKVLGTVIAFLDDDPCKIGSNLHGVPVLGPIFEVARIVRITPHDHALIAIPSIS
IERLRDIYLTLRAAGFTVIKLLPALAQIIDGTAHLVQTREIDPQDLLTRTPVTINLKKSL
AYLCGKRVLVTGAGGSIGSELACQLLSGDVERLYLFGHGENSIYQIDKKIRRLQEEGVGS
RTVIVPVIGDLKDAAYVRYLIEQLRCDAVFHAAAYKHVPMMELNPVSVIENNVFGTKFLL
DACIACRVKRFVLLSTDKAVDPVSIYGVSKMLNEKNVLYAAERVRDFGHDAAYMFVRFGN
VLGSRGSIMPLFIEQIKKGGPVTVTDPAMTRFFMTIPEACSLVLQVGGVGVNGASYLLDM
GEPVSIMETAQQLIRYFGYEPDRDIPIHVVGLRPGERLSEPLVSKDERIEPTVYPKVLRL
REREPLDFAHLERLWDQLYPYCFPSGEKVRYRHKEGLVRVLCDSCATLKQRYMPNSEA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggcgcatccctgggagactgcgtcgggtcgtgtgcgcgtgtcaatgcgttgtat
gtagggagagatggggtgggtgcagaaaatgtatggggctgtggtaggtctgcggtgaga
gagagtgcgcaccgggatggcatctacatcgttggcgcaggattcgcagggagtgtcctt
gcccgtgagatccaaacgaaaaaagtactcggcacagttattgcttttttggatgacgat
ccgtgcaaaatcggatcgaatcttcacggtgtcccggtgcttggtcccatttttgaagtt
gcccggattgtgcgtattactccgcatgatcacgcgctgattgcaattccttctatctcc
attgagcgtttgcgtgacatttacctgacgctgcgcgctgcggggtttacggttatcaaa
cttctgccggcgcttgctcaaatcatcgatggtactgcgcatttagtgcaaacacgtgaa
attgatccgcaggatttactcacgcgcacaccggtgaccattaatcttaaaaagagcctg
gcgtacctatgcgggaaacgcgtgttagttactggtgctggaggatctatcggcagcgaa
ctagcctgtcagttgctctctggtgatgtggagcgtctctatttgttcggtcatggagag
aactccatctaccaaatcgataaaaaaattcgtaggctgcaggaagagggtgttggatct
cgcacagttattgttcctgttattggcgatttaaaggatgctgcgtacgtgcgctatctt
atcgagcagctgcgctgcgatgcggtttttcatgctgccgcgtataagcacgttcctatg
atggaactcaatcctgtttcagtgattgaaaataatgtcttcggcaccaaattcttgctc
gatgcctgtattgcgtgtagggttaagcgctttgtacttttgtccactgacaaggccgtg
gatcctgtttctatctacggagtatctaagatgctcaacgagaagaatgtcttgtatgct
gctgagcgtgtgcgcgatttcggtcacgatgccgcgtatatgtttgtccgttttggaaac
gtattgggttcccgtggttctatcatgccgctctttattgaacaaataaagaaagggggg
cccgttaccgtgacagatcctgccatgacacgattctttatgactattcccgaagcgtgt
tcactcgttttgcaagtcggtggagtaggagtaaatggagcgtcgtatcttttggacatg
ggggagcctgtgagcattatggagactgcgcagcaacttattcgctattttggttacgag
ccagacagagatattcctatccacgtggtgggcttgcgtcctggcgagcgtctcagtgag
ccactcgtttccaaagacgagcgtatagagccgacggtatatccaaaggttctgcgtttg
cgtgaacgtgaacctttggattttgcgcaccttgaacgcctgtgggatcaactgtatcct
tactgtttcccttcaggagaaaaggtgcggtaccggcacaaagaaggacttgtccgcgtg
ctatgcgactcgtgcgcgacactgaaacagcggtatatgccaaatagcgaggcatag
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