Treponema pallidum subsp. pallidum Nichols: TPANIC_0162
Help
Entry
TPANIC_0162 CDS
T02709
Symbol
ruvB
Name
(GenBank) crossover junction endoribonuclease subunit B
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tpw
Treponema pallidum subsp. pallidum Nichols
Pathway
tpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TPANIC_0162 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpw03400
]
TPANIC_0162 (ruvB)
Enzymes [BR:
tpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TPANIC_0162 (ruvB)
DNA repair and recombination proteins [BR:
tpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TPANIC_0162 (ruvB)
RecFOR pathway proteins
TPANIC_0162 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
nSTAND3
AAA_16
Mg_chelatase
AAA_22
NTPase_1
AAA_14
AAA_PrkA
TIP49
TsaE
AAA_33
NB-ARC
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AGN75380
UniProt:
P96115
LinkDB
All DBs
Position
complement(184535..185587)
Genome browser
AA seq
350 aa
AA seq
DB search
MDHTASLSPVRPEAQPTDDRERALRPRLLKDFLGQEKTKRNLRLFIQAARDRNESLDHLF
LIGPPGLGKTTLAHITACELGVECKVTGAPALDKPKDLAGILTALSERSVFFVDEIHRLK
PAIEEMLYIAMEDYELDWVIGQGPSARTVRIPLPPFTLIGATTRAGMVSSPLISRFGIVE
RFEFYTPEELAAIVQRSARLLDITLDARAALALARCSRGTPRVANRLLRRIRDFAQVAGS
AHISETIVRAGLAHLKIDELGLELHDIQLLRVMIEHFGGGPVGAETLAISLGESPETLED
YYEPYLIQIGLMQRTPRGRMATARAYAHLGLPVPEARTLTPHSPEQGTLL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggatcacaccgcgtcactgagtcctgtgcgccctgaagcacaacctacagacgatcgc
gagcgtgcgctcagaccgcgcctcctgaaagactttctaggtcaggagaaaacaaaacgc
aacttacgtcttttcattcaggcagcgcgcgatcgcaacgaaagcttagatcacctgttc
ctcatcggccccccggggctcggcaaaacgacgctcgcgcatatcactgcatgcgagctg
ggcgttgagtgcaaggttacaggcgcaccggcgcttgataaaccaaaagatttagcgggt
atcctcactgcgctgagtgagcgaagcgtcttcttcgtggatgaaatccaccgcctcaaa
ccagccatagaagagatgctgtacattgccatggaggactacgaactggattgggttatc
ggtcagggaccgtccgcgcgcacggtgcgcatcccactccccccgtttaccctcattggt
gcaaccactcgcgcgggtatggtttcaagcccgctgattagccgctttggaatcgtagag
cgcttcgagttctatacccctgaggagcttgctgccattgtgcaacgctcagcgcggctt
ctagatatcacgctcgacgcacgcgcagcgttagcccttgcgcggtgttcgcgaggaaca
ccccgggtggccaaccggcttttgcgccgtatacgcgattttgcccaagttgcggggtct
gcacacatcagcgagacgatagtacgcgcagggcttgcccacctaaagatcgacgaatta
gggctagaactgcacgacatacagctgctgcgcgtcatgattgagcacttcggcggaggg
ccagtgggcgcagaaacgctggcgatctccctcggggaatcaccggaaacacttgaggat
tactacgagccctaccttatccaaattgggctcatgcagcgcaccccccgcgggcgcatg
gccaccgcgcgtgcctatgcgcacctaggtctccctgtccccgaggcacgcacgctcacc
ccgcactccccagaacaaggaacgcttctttag
DBGET
integrated database retrieval system
