Treponema pallidum subsp. pallidum Nichols: TPANIC_0626
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Entry
TPANIC_0626 CDS
T02709
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tpw
Treponema pallidum subsp. pallidum Nichols
Brite
KEGG Orthology (KO) [BR:
tpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpw03400
]
TPANIC_0626 (sbcD)
DNA repair and recombination proteins [BR:
tpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TPANIC_0626 (sbcD)
Archaeal homologous recombinant proteins
TPANIC_0626 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AGN75807
UniProt:
O83634
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Position
682598..683773
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AA seq
391 aa
AA seq
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MKILHTADLHLGKTLHEVSLFASQKKMLGDLCTLLAQDNYAALIIAGDIYDRCVPSAESV
SLFSSFLQNIKRSMPRLPIYLIPGNHDSAQRLSFAQELLKQQGVFIAQDPEESTRPHLLC
HEGETVQLFLLPFLHAGAFSYLDEENTTCLIHTQSELLQEASRRLQRAVSLDTPSILVAH
LFTQKGISCESERPFVGNAVYADPHWFDFFTYVALGHLHKCQKITERMYYSGSPLPYSFD
EANTQKVALSVEIHCNTKGFPIHVTPLPLEPLIPLRTIRDSFHALYTGDRYLLYQRDFLE
ITLTDPALVHNPIGLLKPRYPGLLSIKQENAFAFDIPPPYSSNEGIAPCTHHSLRTHFDV
FMHEVSPTPDDREKGALFQELFDEMQQEFSS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgcacacagcggacctacatctaggcaaaacactccatgaagtatcgctt
tttgcgtcacagaaaaaaatgctcggcgatctgtgcaccctccttgcgcaggacaactac
gccgcgctcatcatcgcaggcgacatctatgaccgctgtgtaccctctgcagagagtgtc
agtctttttagttcttttttgcaaaatatcaaacggtccatgccacggctcccgatatat
ctcatccccggcaaccatgattctgcgcaacgtctctcctttgcccaggagctacttaag
cagcagggagtattcattgcgcaggatcctgaagagagcacccgtccccatctcctctgt
cacgagggggaaacagtgcagttatttttacttccctttctccacgcaggtgccttttcc
tatcttgatgaggaaaacaccacttgtctcattcacacccaatccgaactccttcaagaa
gcctcgcgtcgcttgcagcgtgcagtatcgttggacaccccttctatccttgtcgcacac
ctatttacccaaaaaggtattagctgcgaaagtgaacgcccgtttgttggcaatgccgtt
tacgctgacccacactggtttgactttttcacctatgttgcacttggtcatttacacaaa
tgtcaaaaaatcaccgaacgcatgtactattccggatctcctttgccctattcgtttgac
gaagcaaatacccaaaaggttgcgctttctgtagagattcactgcaacacaaagggattc
cccatccatgtgactccccttccacttgagccacttatccctcttcgcaccatacgcgac
tcattccacgcactatataccggtgatcgctatctcctttatcaacgtgattttttagaa
atcaccctgaccgacccggcgctcgtgcacaatcctattggccttttgaagccgcgctat
ccaggattgctcagtatcaagcaggaaaatgcgttcgcctttgatataccccccccctac
tcctctaacgaggggatagcgccctgcacacaccactcattgcgcacacactttgatgta
tttatgcacgaagtaagccccactcctgatgacagagaaaagggcgctctctttcaggaa
ctttttgacgaaatgcaacaggaattctcatcgtga
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