Treponema pallidum subsp. pallidum Nichols: TPANIC_0709
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Entry
TPANIC_0709 CDS
T02709
Symbol
whiG
Name
(GenBank) DNA-directed RNA polymerase sigma subunit WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
tpw
Treponema pallidum subsp. pallidum Nichols
Pathway
tpw02020
Two-component system
tpw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TPANIC_0709 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TPANIC_0709 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpw03021
]
TPANIC_0709 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tpw02035
]
TPANIC_0709 (whiG)
Transcription machinery [BR:
tpw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TPANIC_0709 (whiG)
Bacterial motility proteins [BR:
tpw02035
]
Flagellar system
Flagellar assembly proteins
Stator
TPANIC_0709 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
AGN75884
LinkDB
All DBs
Position
777488..778276
Genome browser
AA seq
262 aa
AA seq
DB search
MGNTAFEQQSEEELWLEYRRTRSAKIREYFVVQYAPLVKYVASKIAVGKPGNVEFDDLVS
YGIFGLFDAIDKYDPEKNIRFNTYAVTRIRGAIFDELRSIDWVPRSVRQQTRQIEEAIAD
LEARLGRAATDTEIACALNIELEEYHQLLLKVSGTSVISLADSKFGGDERDHVSVGDSIE
APASLNPDVIVEREEIKRIIAEAIRELSQREQQVLILYYYEEMTLKEIGKVLKVTESRIS
QIHTSANLKLKAKLTNIKKGIR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacagccttcgaacagcagtcggaagaggagctttggctcgagtatcggagg
acgcgtagcgcgaaaatacgcgagtactttgttgtgcagtacgctcctctggtcaaatac
gttgcaagcaaaattgccgttgggaaaccggggaacgttgagttcgatgacctcgtaagc
tacggtatctttggtctttttgacgctatcgataaatatgacccagaaaaaaacattcga
tttaatacgtacgcggttacgcgcatccgcggtgctatctttgatgaactgcgctccatc
gactgggttccccggtcggtgcgtcagcaaacacgccagatagaagaagcgattgcagat
ctagaggcacgccttgggcgtgctgccacagatactgagatcgcgtgcgcgctgaatatt
gagcttgaagagtaccaccagctcctcttgaaggtgtccggcacgagcgtgatttccctt
gccgattcgaagtttggtggagatgagcgagaccacgtctctgtgggagacagcatcgaa
gcgcccgcttctctcaatcccgacgtcattgtcgaacgcgaggaaatcaagcgtatcatc
gcagaggcaattagggaactttctcaacgcgagcagcaggtgctcatactatactactac
gaagaaatgaccttaaaggagattggcaaggtgctcaaagtgaccgagtcgcgtatctct
cagatccacaccagcgcgaatttaaagttaaaggcaaagctcaccaacatcaaaaagggt
atccggtaa
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