Treponema pallidum subsp. pallidum Nichols: TPANIC_0770
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Entry
TPANIC_0770 CDS
T02709
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
tpw
Treponema pallidum subsp. pallidum Nichols
Pathway
tpw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPANIC_0770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpw03019
]
TPANIC_0770
03009 Ribosome biogenesis [BR:
tpw03009
]
TPANIC_0770
Messenger RNA biogenesis [BR:
tpw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TPANIC_0770
Ribosome biogenesis [BR:
tpw03009
]
Prokaryotic type
rRNA helicases
TPANIC_0770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DbpA
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AGN75943
LinkDB
All DBs
Position
837580..839529
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AA seq
649 aa
AA seq
DB search
MQGAWLGAHRERAPRALERYGVQRSLCVFVSTRKFHFLLHFPSMDVSFEELGLNEQSLAA
VRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLIQELGSPCEHPGALV
LVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGGEIIVGTTGRVIDHI
ERGSLELSYLRYFILDEADEMLNMGFVEDIESIFSHANKDARVLMFSATMPRQILSIAST
FMGSYEVVEEVTPEEARPLIEQFMWVVRDADKIEALVRLIDVSDNFYGLVFCQTKADADT
VAKSLDERHYHVAALHGDIPQSQREKILERFRTKRARILVATDVAARGIDIEGITHVVNY
SIPHDSATYTHRVGRTGRAGSQGIAISFVRPHETRRMEYLSKHCNGELKASTVPLVEHIL
TQKEGRIFSSLKTHLCQLLSEGVHGTFTRFAQRLLQEDLKARVAEALGTSADVPQEPNVS
LVAALLQIHYGTALDPRQYRDIKTITPETARARPHDAEKAYVRIEYGKKSYLTRKRVVQF
ICALVKIPGHLVDRVDITERCAFARIPRRAAEEAVRLSKKRKDLPRVSFVGHASRLRNTA
TPAEKSTYPRRLPSGEGLREQISRRTSSSKKASGKPEDSLPPPQEHRLD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggggcgtggttgggagcccatagagaaagagctcccagagcgctggaacgctac
ggtgtccagcgctctttgtgtgtttttgtctctacaagaaagttccactttttgctacac
ttcccttctatggacgtgtcctttgaagagcttggtttgaatgaacaatcgcttgcagcg
gtgcgactcaaggggtttcggtgcccaactcccatccaggctgctgccattccccgactg
ttggcaggggatgcgaatatcatcgcaaaagcccgaaccgggactggaaaaacggccgcc
ttcggcctcccccttatccaagaactgggaagcccgtgcgaacacccaggggccttagtg
cttgttcctacaagggagctcgctgcgcaggtcgcaagcgaactgagctccctgaggata
caaaaaatacctcggattcacaccgtgtacggtggggtctccatcgcggagcagctgcgt
aatctcgaacagggtggagagataatagtaggaacgaccgggcgcgtcatcgatcatatt
gagcgcggttctctcgagctgtcttatctgcgctacttcatattagacgaagcggatgag
atgctaaacatgggtttcgttgaggatatagagtctatcttctctcatgcaaataaagac
gcacgcgtccttatgttttctgccactatgcccaggcagatcctttctattgcctctacc
ttcatgggaagctacgaggttgttgaagaagtcactccagaagaggcgcgcccgctcatt
gaacaatttatgtgggttgtaagggacgctgacaaaatcgaggcgcttgtgcgccttatt
gatgtgagcgacaacttttacggtctggtgttctgtcaaaccaaggcggacgccgacact
gttgcgaaatctctagacgaacgccattaccatgttgctgcacttcacggagatattccg
caaagccagcgagaaaaaattctcgagcgctttcgtacaaaacgagcgcgtatcctcgtc
gccactgatgttgccgctcgcggcattgacatcgaaggaattacgcacgtggtgaactac
tccattcctcatgatagcgctacttacacgcaccgcgtcggcagaactggacgcgcagga
tcacagggtatcgctatcagttttgtacgcccacacgagacacgacggatggagtatctg
agtaaacactgtaatggcgaattgaaagctagtacggtacctttggtggagcacatcctt
actcaaaaggaggggcgtattttctcgtccctcaagactcatctttgccaattactctct
gaaggggtgcacggaacctttacccgttttgcgcagcggctgctccaagaagaccttaaa
gctcgcgtggcagaagccctgggtacttccgccgacgttcctcaggaaccgaacgtgtcg
cttgtcgccgcgctcctgcaaatccactacggtactgcgctggaccccaggcagtaccgg
gatattaaaacgattacgccagagacggcccgcgcacgtccccatgacgcggaaaaggcg
tatgtgcgcattgagtacggaaaaaaaagctacctcactcggaaacgtgttgtgcagttc
atctgtgccctggtaaaaatccccggtcatcttgtagatcgcgttgacataaccgaacgt
tgcgcgtttgcgcgcataccccgacgcgcagcggaggaagcagttcgcttatccaagaag
cgcaaggacctgccgcgcgtttccttcgttgggcacgccagtcgcctaagaaataccgct
acccctgcagaaaagtctacctatccaaggcgcctcccttccggagaaggcctaagggag
cagatctcaaggagaacctcttcctctaagaaggcttctgggaaaccggaggattctctt
ccccctccccaagaacatcgccttgattga
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