Treponema pallidum subsp. pallidum Nichols: TPANIC_0889
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Entry
TPANIC_0889 CDS
T02709
Symbol
truB
Name
(GenBank) tRNA-pseudouridine synthase I
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpw
Treponema pallidum subsp. pallidum Nichols
Brite
KEGG Orthology (KO) [BR:
tpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpw03016
]
TPANIC_0889 (truB)
Enzymes [BR:
tpw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TPANIC_0889 (truB)
Transfer RNA biogenesis [BR:
tpw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TPANIC_0889 (truB)
Prokaryotic type
TPANIC_0889 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AGN76058
UniProt:
O83859
LinkDB
All DBs
Position
complement(967920..969020)
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AA seq
366 aa
AA seq
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MCRLSMPDAIVPFAKVSGLTSFAALAQVRRLLGVKKVGHTGTLDRFADGLLLLLVGGFTK
LAPVMTRLEKSYEARIQFGVQTDTLDPEGAVVRCSLFPTFARVRAALPHFTGSIDQVPPE
YSALKFGGVRASDRVRRGEAVCMKARRVFVFDLQVLGCEADLGEFKKTQAGRGAAIADLD
LTRVRAVTLYVRCSAGFYVRALARDIAAACGSCAYVSHLRRTRIGPFDLAQAAGVSRLGS
WTWGKERASCGAACFDVGAPPPPSSGGVATDSVSFGCEDLTVREIKQAVVSCDVDFANRI
GLTACSVHAQYASRFLHGERIRACWFQSFGTRRPGERALVFSEGRCLGLIRKAANGFSYD
AVFCTE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcagactgagcatgcctgacgctattgttcctttcgcaaaggtttccggtcttacg
agttttgcggcactggcacaggtcaggcgtcttctgggagtaaaaaaggtagggcatacg
gggacgcttgatcgctttgctgatgggctgctgttgcttttggtagggggctttaccaaa
ctcgcgccggtgatgactcgcttggaaaagagttacgaggctcgtatccagtttggggta
caaacagacactctagatccggagggggctgtcgtgcggtgctccttgttcccaacattt
gcgcgcgtgcgtgcggcgctgcctcacttcactgggagtattgatcaggtgccgcctgaa
tattcggcgctaaaattcggaggtgtgcgtgcgtccgaccgggtgcggcgtggggaagca
gtgtgcatgaaggctcggcgtgtgttcgtctttgacttgcaggtactaggttgcgaggcg
gatctgggtgaattcaaaaagacgcaggcggggaggggggctgcgattgctgatcttgat
ctgacgcgcgtgcgtgctgtaacgctgtacgtacgttgttcggcaggcttctacgtgcgt
gcacttgcgcgcgacatagcagccgcttgcggctcttgcgcgtatgtttcacatttacgg
agaacacgcattggaccctttgatcttgcacaggcggcgggtgtgtctcgtctcgggtcc
tggacatggggcaaagagcgtgcgtcttgcggtgccgcttgctttgatgtgggtgctcca
ccgcctccgtcctcaggcggcgtggcgaccgattcagtctctttcgggtgtgaagacttg
acggtgcgtgagattaagcaggcagtggttagctgtgatgtggactttgcgaatcgtatt
ggacttacggcgtgttcagtgcatgcgcagtatgcgtcgcggtttttgcatggggaaaga
atacgcgcatgttggttccagtcgtttggtacgcgaaggcccggggaacgtgcgttggtg
ttttccgagggtcgctgtcttggattaataaggaaagcggcgaatgggttttcgtatgat
gcggtattttgtacggagtga
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