Treponema pallidum subsp. pallidum Nichols: TPANIC_0993
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Entry
TPANIC_0993 CDS
T02709
Symbol
rlpA
Name
(GenBank) putative rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
tpw
Treponema pallidum subsp. pallidum Nichols
Brite
KEGG Orthology (KO) [BR:
tpw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpw01011
]
TPANIC_0993 (rlpA)
Enzymes [BR:
tpw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TPANIC_0993 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tpw01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TPANIC_0993 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AGN76157
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All DBs
Position
complement(1078854..1079879)
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AA seq
341 aa
AA seq
DB search
MMDKRVVAVAAVLWNVQMLFAAGEVIVPEGYASYYAESFNGRPTASGEIFDMNAYTAAHR
TLPFGTVVELTNLDNGKKVIVRINDRGPYAANREIDVSKAAAVALDMLNAGVARVSIHKA
DPNAHASQQRNDRQTSPGVLPQDSFGVPPTAPTSSAPVMYADPHNPPPAPVGRRAGTPGV
PGVANTTDVPASEYGAPPVAYAAPGSTPSRVPYGTAVPGSAAPNSHAQPVPSSSSYAAAA
PLPYAAGGGKVSGMKSVYTPTHSGETRGVLWRIQLGAFVREENALRLVVKLREAGFDPSY
ERTEHAVRVVLPGIRPADLERVKHALKRGRFHDYVIRQESW
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgatggacaagcgtgtcgttgcagtggctgcagtattgtggaacgtgcagatgcttttt
gcagccggcgaggtaatcgttccggaagggtatgcttcctactatgcggagtcttttaac
ggaagacctaccgcaagtggggagatttttgacatgaacgcgtatactgccgcgcaccgc
acgcttccctttggtacggttgtggagttgacgaacttggacaacggcaaaaaggtaatc
gtgcgcatcaatgatcggggaccttacgctgcaaatagagagattgacgtgtcaaaggct
gcagctgttgcgttagacatgctgaacgcgggggtggcgcgcgtctccatacacaaggca
gatccgaatgcgcacgcttcacagcaacgcaacgataggcagacttctcctggtgtctta
cctcaagattcctttggtgttccgcctactgctcccacgtccagtgcgcctgtcatgtat
gcggatcctcataatccaccgccagctcctgtcggaaggagggctggaactccgggtgtg
ccgggagtggcgaatacaacggatgtccccgcttcggagtatggtgcgccgcctgtcgcg
tacgcagcaccgggttcgactcccagtcgggttccctatgggacggccgtgcctggctcc
gctgcacctaactcgcacgcgcagcctgttccttcgtcttcttcctatgcggctgctgcg
cctcttccctacgcagctggtggcgggaaggtgtcagggatgaagtcggtgtatacgcca
acccattcgggggaaacgcggggggtgctttggcgtatacagttgggagcctttgttcgt
gaggagaatgcgctccgcttggtagttaagctgcgcgaggcgggctttgatccttcatat
gagcgaacagagcacgcggtgcgcgtggtgctgccggggatacgccccgcggacctagag
agggtaaagcacgcgctgaaaaggggaaggtttcacgattacgttatccgccaggaaagt
tggtag
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