Turneriella parva: Turpa_0033
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Entry
Turpa_0033 CDS
T02157
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tpx
Turneriella parva
Pathway
tpx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Turpa_0033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpx03400
]
Turpa_0033
Enzymes [BR:
tpx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Turpa_0033
DNA repair and recombination proteins [BR:
tpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Turpa_0033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AFM10696
UniProt:
I4B089
LinkDB
All DBs
Position
3709..4521
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AA seq
270 aa
AA seq
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MIFGSCAILFATGMRIASFNVNGIRAIEKKGELVKLLAAEKPDIVFLQEIKAKPDQLSDA
LLKPDGYEAHYHSAEKPGYSGTGVLVRSGLFAKMQVLRGMPDWNDHEGRVLGVEAGDLVI
FGNYFPNGGKSDAAWREKLVFYDHFHQYIAALRKKKKRVLFTGDLNVAHNPIDLARPKEN
EKHVGFLPEERAWVDRLVADNWVDVFRSRYPETVSYTWWQMQSRARERNIGWRIDYFIVD
KPLYPKVREIRHLNDHQGSDHCPIVLDIDL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgattttcggttcatgcgcgattctgtttgctacgggcatgcgcatcgcctcgtttaac
gtcaacggcattcgggccatagagaaaaaaggtgagctggtgaagcttttggcagccgaa
aagcccgacattgttttcttgcaggagatcaaagccaaacccgaccagctgagtgatgcg
ttgctcaaacccgatggttacgaggctcattaccatagcgccgagaaacccggctattcg
ggaaccggtgtgctcgtgcgctcagggcttttcgctaaaatgcaggttctgcgcggcatg
cccgactggaacgaccacgaaggccgtgtgctcggggtcgaggccggcgacctcgtcata
ttcggaaattatttcccgaacggaggcaaatcagacgcagcctggcgcgagaagctcgtt
ttctacgatcattttcatcagtatatcgccgccctgcgcaagaaaaagaaacgcgtgctc
ttcaccggcgacctcaatgtcgcccacaaccctatcgacctcgcgcggccgaaagaaaac
gaaaagcatgtcggcttcttacccgaagagcgcgcgtgggtagaccggctggtcgccgat
aactgggtcgacgttttcagaagccgctaccccgaaacggtcagctatacctggtggcaa
atgcagtcgcgcgcccgcgaacgcaatatcggttggaggatcgattactttattgtcgac
aaaccgctatacccaaaggtgcgcgagatacgccacctcaacgaccaccaagggtcagac
cattgccctatagtgctggatatcgatttgtga
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