Turneriella parva: Turpa_1565
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Entry
Turpa_1565 CDS
T02157
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tpx
Turneriella parva
Pathway
tpx03030
DNA replication
tpx03430
Mismatch repair
tpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Turpa_1565
03430 Mismatch repair
Turpa_1565
03440 Homologous recombination
Turpa_1565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpx03032
]
Turpa_1565
03400 DNA repair and recombination proteins [BR:
tpx03400
]
Turpa_1565
Enzymes [BR:
tpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Turpa_1565
DNA replication proteins [BR:
tpx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Turpa_1565
DNA repair and recombination proteins [BR:
tpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Turpa_1565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
Microp_apicomplexa_12
Cactin_mid
Motif
Other DBs
NCBI-ProteinID:
AFM12213
UniProt:
I4B4K6
LinkDB
All DBs
Position
1565523..1569026
Genome browser
AA seq
1167 aa
AA seq
DB search
MAENDFAHLHLHSTYSLLDGAIRPTDLVKKVKELGMKSVAVTDHGNMFGAIEFYEAAKKE
GVKPIIGYEAYVAPGSRFEKRNQEDLVDGRAYHLILLAKNKAGYKNLTKLASKAYTEGLY
YKPRIDYELLAQHSEGLVGLTACLAGEVNRLIYRQQMDKAKELSGRLNEIFGQGNFFLEI
QNHGIPEQIEVARGAADISRALNIPLVLTNDSHFLTRNDQKAQEVMLRIQMNKKITDPLE
FGFNDEFYVKSPAEMALLYPELPQAFTNTLEIAEMCNFDFEFGAPLLPDFKIPPGMSLGD
FLVAETIAGLSRRFDGNVSAKHRERLQYELDVIKNMGFEGYFLIVADFINYAKRNGIPVG
PGRGSAVGSLVAYSLGITDLDPLKYDLLFERFLNPSRKEMPDIDVDFCRDRREEVIRYVV
DKYGEDHVSQIITFGTLSAKAVIKDVARVLGIDYQIINALSKNLPDTPGISLKDAVAATP
EIKKYFDQGDKERQLYAIAQTLEGMPRNSGKHAAGVVIAPQPLDEIVPLAKDSKTDSIVT
QYDMTLLPKVGLVKMDFLGLKNLTVIQTCVKEIERRHGVVLDMSRLPLDDTKTYQLLTQG
KTRGIFQVESTGITKLLMQAKPKAFEDIVAIIALYRPGPLESGMTESYVKRKNGEMKLEY
PHISLEPILRDTYGTFVYQEQIMLASQIIGGFTLAEADTLRKAMGKKNAEEMAKMKAKFV
TGAKEKSFQEKWSTELFDNMAEFAKYGFNKSHSAAYGLITYQTAYLKTNYTIEFLKASMD
ADIGDTDKIIGYINHAKELGIEVLPPDVNESDVYFTILDDKRLRFGLLGIKGLGEAPAKA
IVEARAALGGRFKTLADFAESLDTKTLNRRLLDALAFSGATDSLGYNRAAIVLSADEILK
FASSAQLDKSSGQVSLFGGTEEEAARLQIQNTAEFSDEEKLLKEKQTLGLYLTSHPLDRF
DEMASHMRLTKIADLDDGSSKDRRVSVLGVVDSLRTVTSKRGAFYLLKITDKTGQIEVRI
FQNMFEQVKPFINENSCAIFDIRVQAFREEEVTTMNYSLAGVVPETKFSERVDKSLHLYL
NVKTAADLEAMIGKVKTTLRKYSGNNPVYLYWREVEGGPLQSIKAHSSFCVKYDKALLKD
VSQLLGEEKYALFKVGGVMEAAKAGVS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaacgacttcgcgcatttgcatttgcattcaacgtattcgttgctcgatggc
gcgattcgcccaaccgatttagtcaaaaaggtcaaagagctcggtatgaagtcggttgcc
gttactgaccacggcaatatgtttggtgcgatcgaattttacgaagccgccaaaaaagag
ggtgtgaaaccgattatcggctacgaggcatacgttgcaccgggtagccgctttgaaaag
cgcaaccaagaagacctcgtcgacggccgcgcataccacttgattctgctcgcgaaaaac
aaagcaggatataaaaacctcacgaagcttgcatcgaaagcgtacaccgaaggcctctat
tacaaaccccgcatcgactatgaattgctcgcgcagcattcagaaggtctggtcgggtta
actgcctgccttgccggcgaagtcaatcgcctcatctaccgccagcagatggataaggcg
aaagagctttcgggccgcctcaatgaaatctttgggcagggtaacttctttctcgagatt
cagaaccacggtatacccgagcagatcgaggttgccaggggtgcagcagatatatcgcgg
gcattgaacataccgctcgtgctcacgaatgactcgcactttctcacgcgcaatgaccag
aaggcgcaagaggtaatgctgcgcattcagatgaacaagaagattaccgacccactcgaa
tttggtttcaacgacgagttttatgtcaaatctccggctgaaatggcgctgctttacccc
gagctgccgcaggcgttcaccaacacgctcgaaatcgccgagatgtgcaattttgatttc
gagttcggggcaccgcttctgccagattttaagattccccccggtatgtcgctcggcgat
tttcttgtggctgaaacgattgcagggctttcgcgccgcttcgacggcaacgtctcggcg
aaacaccgcgaacgactgcagtacgagctcgatgtcatcaagaacatgggctttgagggt
tattttctgatcgtcgcggatttcataaactacgcaaagcgtaacggtattccggttggc
ccgggccgtggttctgccgtcggctcgctggtggcctactcgctcggcatcaccgatctc
gaccccctaaagtacgacctgctgttcgagcgctttctgaatccgtcgcgcaaagagatg
cccgatatcgatgtcgacttctgccgtgaccgccgcgaagaggtgatacgctacgtggtc
gataaatatggcgaagaccatgtttcgcagattattaccttcggtaccctctcggccaag
gccgtgatcaaagacgtcgcgcgggtgctcggcatcgactaccagattatcaatgcgctc
tcaaaaaacctgcccgatacaccgggcatttcgctcaaagacgcagttgcagccacgccc
gagatcaagaaatacttcgaccaaggcgacaaagaacggcagctctatgccatcgcgcaa
acgctcgagggcatgccacgcaactcgggtaagcacgcagccggcgtcgtgatcgcgccg
caaccgctcgatgagatcgtgccgctcgcaaaagattcgaagaccgattcaatcgttacc
cagtacgacatgacgctcttgccgaaagtcggccttgtcaagatggactttctcggtttg
aaaaacctcacagtaattcaaacttgcgtcaaagagattgagcgccggcacggcgtcgtt
ctcgacatgtcgcggctaccgctcgacgacaccaaaacctaccagctgctgacgcagggc
aaaacccggggcatctttcaggttgaaagcacgggtatcacgaagctcttgatgcaggca
aagcccaaggcattcgaagatatcgtggcgattatcgcgctctaccgcccaggcccgctt
gagtcgggcatgaccgaaagttacgttaagcgcaagaacggcgagatgaaactcgagtat
ccgcatatttcgcttgaaccgattctgcgcgacacgtatggcacgtttgtctatcaagag
cagattatgcttgcgtcgcagattatcggcggcttcactctcgccgaagccgatacgctc
agaaaagcgatgggcaagaagaacgccgaagaaatggcgaagatgaaggcaaagtttgtt
accggtgcgaaagagaaatcttttcaagagaagtggtcgacagaacttttcgacaacatg
gccgaatttgcgaaatacggctttaacaagtctcactcggccgcctacggattaatcacc
taccagactgcatacctcaagacgaactacacaattgaattcttaaaggcttcgatggat
gccgacatcggcgacaccgacaagattatcggctacatcaaccacgcaaaagaactcggc
atcgaggttctgccccccgatgtcaatgagtcagacgtgtatttcacgattctcgacgat
aagcgacttcgttttggtctcttgggaatcaagggtctcggcgaagctccggcgaaggcg
atcgtcgaagcgcgcgcagccctgggcggcaggttcaagaccctcgccgactttgccgaa
tcgctcgacaccaaaacgctcaatcgccgcctgctcgacgcgctggccttctcgggtgca
accgattcgctgggctataaccgcgctgcgatcgtgctttcggccgatgaaattctgaag
ttcgcgtcatcggcgcagctcgataaatcatcagggcaggtatcgctttttggcggcaca
gaagaagaggccgcgcggctgcagatacaaaataccgccgagttctctgatgaagaaaag
ctgcttaaagaaaagcaaactctgggcctctaccttacctcgcatccgctcgaccggttt
gatgagatggcatcgcatatgcgcctcaccaaaatcgccgacctcgacgacggctcgtct
aaagatcgccgggtttcggttttgggtgtggtcgattcgctgcgaactgtcacctctaaa
cgcggtgcattttatctgctgaaaattaccgacaagacgggccagattgaagtgcgtatt
tttcagaatatgtttgagcaggtcaaaccgttcatcaatgaaaacagttgtgccatcttc
gacattcgcgtgcaggcttttcgtgaagaagaagtgacgaccatgaattattcgctcgcg
ggcgtggtgcccgagacgaagttcagcgagcgggtcgataagtcattgcatctctaccta
aatgtcaaaaccgccgccgatctcgaagccatgattggcaaggtgaaaacaacactgcgc
aaatattccggcaataatccggtttatctatactggcgcgaggtcgagggaggcccgttg
caatcgatcaaggcgcactcgagtttttgcgtgaagtatgataaggcactgttaaaagac
gtcagccagcttctgggcgaagaaaagtatgccctcttcaaagttggcggcgtcatggaa
gctgcgaaagccggcgtttcttaa
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