Turneriella parva: Turpa_1727
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Entry
Turpa_1727 CDS
T02157
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
tpx
Turneriella parva
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
EAL
PAS_9
GGDEF
PAS
PAS_4
PAS_8
GAF_2
PAS_11
GAF
GAF_3
PAS_12
Motif
Other DBs
NCBI-ProteinID:
AFM12374
UniProt:
I4B517
LinkDB
All DBs
Position
complement(1730968..1734738)
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AA seq
1256 aa
AA seq
DB search
MLKKALRVSCVYLVFGAIWIIASDWIVNRYFPDVDRVQSLQTAKGLLFVAISTIVIFLAA
WRELKLEHRYQLKLSAAESQLHQVAERTSDLVYTFQRQPERRFTYVSPSVLSITGYSQQD
HYRDAELSYKIVHPEDRPLLDSLIEPGNEGKPFKLRWIHKSGKIIYIEVSNVALRDEHGN
IVGVSGMGRDVTQAEIARQELEHLNHAYAVLWQVNKLIVNQGSVAEIYQEACAIPLSSGN
FSLVWIGRVDRAANRLDLACSSGDKIGYLDGLNVTLDDTPTGRGPSGLAARMGKAYWSTD
IATDDSMAPWRARALSNGFRSSAAFPLKVDGQVTAVWTLYSPVAGYFTEAVQRLYQQLAG
DISFALQNLANKAEKEKLAKDLEISTKRWQFAVEASGEGLWDWNLKTDEVYFSETIASML
GYTLAEWGTTLDAWQTRVHPEDLAAAKEAIAAHFRGESAVYECEHRMLCKDGSYRWILDR
GSIIERSKTGEPLRMIGLHRDITAEREIKLATQERNESLQAIISESPLGIAIVSTETGKI
ISTNPAFCTLLARSDAELRSTIWQSFTYPEDIEANEAKNREIMSGRLSGYVMEKRFIRPD
KTIIWARLTVRSLRHYRAAENVHLALVEDITDRVEREDRLRALFAEAPLGIAVIDSDTAQ
VLSANGKFCEIAGRDEAELMRLTWKDFTHPEDIAGDQAFMDEIVSGKRKGFNMVKRYLTG
SGGVVWVNMTIAKLSHYHEDRRVHICMVEDITDRIESEKRMRLDAAVISHTRDGVVITTL
EPKIVSVNQAYCDITGYSADEVVGKNPSILQSGRQDRDFYAAMWREIKSKGRWQGELYNR
RKNGEIYPQISTIDTIYNADGKPEYYVGVFSDISKLKDSEESFERLAHYDVLTGLPNRLM
VTNRLAHAVASAGRHRRMVAVLFMDLDHFKNVNDSLGHVAGDELLAAVAMRLKARLRAED
TIARLGGDEFIVLLEDIESAEHAALVARDLLSNLSAPFELASEHEIYSGGSIGISIYPQD
GENPHELIRNADAAMYLAKSEGRNTFRFYTQSLTDAARKRLALEAALRRALERGELYVKY
QPIVDIASGAIVGAEALCRWRTAEGEEISPADFIPVAESTGLIVQVGDFVARTALAVART
WAANQATFKTMAVNFSVRQFQSHDWYERFSHILRESGVAADRVEVEITESDIMQKSEEGI
EVIRELHSSGVRIAIDDFGTGYSSLSYLQRFSVNKMKIDQSFVRDLPESAAPISAC
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaaagcgttacgcgtctcatgcgtctatttggttttcggggccatctggatc
atcgcctctgattggattgtaaaccggtattttcctgacgtcgacagggtgcagtcactg
caaacagcaaaaggcctgctgttcgtcgctatatccaccattgttatttttctcgccgcc
tggcgcgagctaaaattagaacatcgctaccaactcaaactcagcgcggccgaaagccag
ctgcaccaggtggctgaacgcacttctgatctcgtctatacttttcaacggcaaccagaa
cgcagattcacctatgtgagcccatcggtgctgagcattacgggttattctcagcaagac
cattaccgcgatgccgagctgagctacaagatcgtacaccccgaagacagacctttgctc
gatagcctcatagaaccgggcaatgagggcaaacccttcaaacttcgctggattcataaa
tcgggcaagatcatctatatcgaagtgagcaacgttgccctgcgcgacgagcatggcaat
atcgtcggcgtgtcgggcatgggccgtgacgtgacgcaggcagaaatagcacggcaagag
ctcgaacacctgaaccatgcttatgcggtgctctggcaggtgaacaagctgatcgtgaat
cagggctctgttgcagaaatttatcaagaggcctgcgctattccgctgagcagcggcaat
ttttcgctcgtctggataggccgtgtagaccgggccgcgaaccgactcgacctcgcctgc
agttcgggcgataaaatcggttacctcgatggcttgaatgtcacgctcgacgatacaccg
acggggcgcgggccttcggggcttgcggcgcgcatgggaaaagcatactggtcgacagat
attgcgacagacgactccatggccccgtggcgcgccagggcgctctcaaacggttttcgc
tcttcggctgcgtttccgctgaaggttgacgggcaggtaaccgccgtctggactctgtat
tcaccagtcgcggggtatttcaccgaggcggttcaacgactctaccagcagctcgccggc
gacatcagtttcgcactgcaaaacctggcgaataaggcagaaaaagagaagctggcaaaa
gatcttgagatcagcaccaaaaggtggcaatttgcggttgaagccagcggtgaaggtctg
tgggactggaatctcaagaccgacgaagtgtatttttcagagacgatcgcgtcgatgctg
ggctacacacttgctgagtggggcacaaccctcgacgcctggcagacgcgcgttcacccc
gaagatctggcggcagcaaaagaagcaatagcagcgcactttcgtggcgaatcggcagtt
tacgaatgtgagcaccgcatgctctgtaaagacggcagctaccgctggattctcgatcgc
ggtagcatcattgaacgcagcaagacgggtgaacctctgcgcatgatcggtctgcaccgc
gacattaccgccgagcgcgaaataaaactcgcaacgcaagaacgtaacgaaagcctgcag
gcaatcatctcagaatccccgctcggtatcgcgattgtcagcaccgaaacgggaaaaata
atttcgacaaacccggcgttctgcacgctgctcgcgcgcagcgatgccgagctacgcagt
accatctggcagagttttacttaccctgaagatattgaagcaaacgaggccaagaatcgt
gaaattatgagtggccgcctatcggggtatgtcatggaaaagcggtttatccgccctgac
aagacgatcatctgggcgcgcctgaccgtgagaagcctgcgccactaccgggcggcagaa
aacgtacacttggcacttgtcgaagatattaccgatcgcgtcgaacgtgaggatcgcctg
cgtgcgctcttcgccgaggcaccattgggcattgcggtcatcgactcagatacggcgcag
gtattgtcggcgaacggcaaattctgcgaaatagcgggccgcgacgaggccgaactgatg
cgcctcacctggaaagactttacccaccccgaagacatcgccggcgaccaggcgttcatg
gacgaaatcgtgtcaggcaaacgcaaaggcttcaatatggtgaagcgctacctcacaggt
tctggaggtgttgtctgggtaaatatgacgatcgcgaagcttagccattaccatgaagac
cggcgcgtgcatatttgcatggtcgaagatatcacagaccgcatcgaaagtgaaaagcgc
atgcgcctcgatgcggcggttatcagccacacccgtgacggggttgttatcacgacgctc
gaaccaaaaattgtttctgtcaaccaggcttattgcgacatcacgggctacagcgccgac
gaagtcgtcggcaagaacccttcgattctgcaatcgggcaggcaagaccgcgacttctac
gcggcgatgtggcgcgagatcaagtcaaaaggcaggtggcagggcgaactctacaaccgc
cgcaagaacggtgagatatatccgcagatcagcacgatcgacactatctataacgccgat
ggcaaacccgaatattacgtcggcgtcttctctgacatcagcaagctgaaagacagcgaa
gagagttttgagcgcctcgcgcactacgacgttttgacaggtctgcccaaccgattgatg
gtgactaaccgtctcgcgcacgcagtcgcctcggcaggtcgccaccgccgcatggtcgcc
gttcttttcatggatctcgaccattttaaaaatgtcaacgacagcctgggccacgtcgcc
ggcgacgaacttctggcagcggttgcgatgcgcctgaaagcacgccttcgggccgaagac
acgattgcgcgtctcggaggcgacgaattcatcgtgctacttgaagacatcgaatctgcc
gagcatgccgcgctggttgcgcgtgaccttttaagcaacctgtctgcaccctttgagctg
gcgagtgagcatgaaatctatagcgggggcagcatcggcatcagcatctacccgcaagac
ggtgaaaatccgcatgagcttattcgcaatgccgacgccgccatgtatcttgccaaatca
gaaggacgcaacacgttcaggttctacacgcagtcgctgactgatgccgcccgcaaacga
ctggccctcgaagcggcgctgcgccgcgccctcgagcggggcgaactctatgtcaaatac
caaccaatcgtcgacattgcctcgggcgcaattgtcggcgcagaggcgctttgccgctgg
cgcactgccgagggcgaagagatttcgcccgctgactttatacctgtggctgagtctacc
ggccttattgtgcaggtcggcgacttcgtggcgcgcaccgcgctcgctgtggccagaaca
tgggcagcaaaccaggcgacttttaaaacgatggctgtgaatttttcggtgcgccagttt
caaagccacgactggtacgagcgttttagccacatcttgcgcgaatcgggtgtcgcggct
gatcgcgtcgaagtcgaaattaccgagtcagacattatgcaaaagagcgaagaaggcatc
gaggtcatacgcgaactgcatagttcgggagttcgcatcgcgatcgacgattttggcaca
ggctattcctctctgtcttacctgcagcgcttctctgtgaacaagatgaagatcgaccag
agttttgtgcgcgatctgccagaaagcgcagcgccaatttctgcttgctga
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