Turneriella parva: Turpa_2270
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Entry
Turpa_2270 CDS
T02157
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
tpx
Turneriella parva
Pathway
tpx02020
Two-component system
tpx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tpx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Turpa_2270
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Turpa_2270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpx03021
]
Turpa_2270
Transcription machinery [BR:
tpx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Turpa_2270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AFM12915
UniProt:
I4B6K8
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All DBs
Position
2338398..2339723
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AA seq
441 aa
AA seq
DB search
MPKAQLRQHTALKTTVRQKLHGTLTHAVQLLSLPQHELREEILRVIAENPFVEEISSGEA
PPISTGEGRDFIASAHIGLQENLLLQLVDMGLPDKIYDLARIIVSTIDNDGFTTFPHRTI
IADYNFSSRDLRACIEYLKQLEPCGVGAENLWQSLRWQAEARYGKDELLFDLIDMLGQAR
EGLSRFSQAEKNSLCEILEIDLETLDAKIKLLTALDPHPVNRSDGSAAEWALPEIFFEVK
EKQVYVKVSDQYLPRFRVNHKLYEQMRGKKTPGVADSAAATRQAEWQATYHTAKSLVETL
AFRSDTLMQVARIIAVKQYEFFTRGSAYIRTMSLKDLAQETNRHVSTISRILNRKYFHCS
WGIFPLRLFLMRKIKSSDGSERSAEDLKTAILTLLAQDSERKKSDRVIAEILQDQGFEVK
RRTVNKYRRLIHQKSSRKKSK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggcccaactcagacagcacacagcgctcaaaacgactgtcaggcaaaaatta
cacggtacgctgacgcatgcggtacagctgctgtcattgccgcagcatgagttgcgagaa
gaaattctgcgcgttattgccgagaatccgtttgttgaagaaatttcgtcgggtgaagcg
cccccgatttcaacaggtgaggggcgcgactttatcgccagtgcgcacatcggcttgcaa
gaaaacctgctgctgcagctggtcgacatgggcctgcccgacaaaatttatgatctggcg
cgtattatcgtctcgacgatcgacaatgatggctttaccacttttccccaccggacgatt
attgccgactataacttcagttcgcgcgacctcagggcgtgcattgaatacctcaaacag
ctcgaaccctgcggcgtcggggccgaaaatctctggcagagcctgcgctggcaggccgaa
gcgcgttatggtaaagatgaactgctcttcgacctgatcgatatgctggggcaggcgcgt
gaaggcctttcgcggttctcgcaggcagaaaaaaactcgctgtgcgaaattctcgaaatt
gacctcgaaactctcgatgccaagattaagctgctgaccgcgctcgacccccacccggtg
aaccgcagcgacggcagcgccgccgagtgggccttacccgaaatattctttgaagtcaaa
gagaaacaggtttacgtcaaagtctccgatcagtatttaccacgatttcgcgtgaaccac
aagctctatgagcagatgcgcggcaaaaaaactcccggggtggcagattctgcggccgcg
acgaggcaggcagagtggcaggccacttaccacaccgcaaaatcgctcgtcgaaactctt
gcctttcgatctgacacgcttatgcaggtcgcgcgcattatagcggtaaagcagtacgag
ttttttaccaggggctctgcttacatacgcacgatgagtctcaaagatctcgcgcaagaa
accaatcgccatgtttcaaccatcagccgcatcctgaaccgtaagtattttcactgctcg
tggggtatttttccgctgaggctttttctgatgcgcaaaatcaagtcgtctgacggcagc
gagcgcagcgccgaagacctgaagacggcaattctgacattgctcgcgcaagactcagaa
cgtaaaaaatccgaccgggttattgctgagatacttcaagaccagggttttgaagtgaag
cggcgaactgtcaacaaataccgccggctcattcaccagaaatcatcgcgtaagaaatcg
aaatga
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